ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot
Search for

HAMAP annotation rule: MF_01252


General rule information

Accession MF_01252
Dates 24-AUG-2004 (Created)
19-AUG-2008 (Last updated, Version 18)
Data class Protein
Predictors HAMAP; MF_01252; [distribution of match scores in UniProtKB];[seed alignment for MF_01252]


Propagated annotation

Identifier, protein and gene names
Identifier HMP
Protein name
RecName: Full=Flavohemoprotein;
AltName: Full=Hemoglobin-like protein;
AltName: Full=Flavohemoglobin;
AltName: Full=Nitric oxide dioxygenase;
Short=NO oxygenase;
Short=NOD;
EC=1.14.12.17;
Gene name hmp
Comments

case <OC:Proteobacteria> or <OC:Bacillales>
FUNCTION: Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress (By similarity).
end case

CATALYTIC ACTIVITY: 2 NO + 2 O(2) + NAD(P)H = 2 NO(3)(-) + NAD(P)(+).
COFACTOR: Binds 1 heme B (iron-protoporphyrin IX) group per subunit (By similarity).
COFACTOR: Binds 1 FAD per subunit (By similarity).
DOMAIN: Consists of two distinct domains; an N-terminal heme-containing oxygen-binding domain and a C-terminal reductase domain with binding sites for FAD and NAD(P)H.
SIMILARITY: Belongs to the globin family. Two-domain flavohemoproteins subfamily.
SIMILARITY: In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
Cross-references
Pfam PF00970; FAD_binding_6; 1;
PF00042; Globin; 1;
PF00175; NAD_binding_1; 1;
PRINTS PR00371; FPNCR; 1;
PR00410; PHEHYDRXLASE; 1;
PR00188; PLANTGLOBIN; 1;
PR00406; CYTB5RDTASE; 1;
PR00409; PHDIOXRDTASE; 1;
PROSITE PS01033; GLOBIN; 1; trigger=PRU00238;
PS51384; FAD_FR; 1; trigger=PRU00716;
Keywords

case <OC:Proteobacteria> or <OC:Bacillales>
Detoxification.
end case

FAD, Flavoprotein, Heme, Iron, Metal-binding, NAD, NADP, Oxidoreductase, Oxygen transport, Transport.
Gene Ontology
GO:0005344; Molecular function: oxygen transporter activity.
GO:0008941; Molecular function: nitric oxide dioxygenase activity.
GO:0015671; Biological process: oxygen transport.
Features
From: HMP_ECOLI (P24232)
Key     From     To       Description   Condition   FTGroup
DOMAIN     151     251       FAD-binding      
NP_BIND     204     207       FAD (By similarity)   R-[QN]-Y-S  
NP_BIND     268     273       NADP (By similarity)   G-[VI]-G-[QILAV]-T-P  
NP_BIND     389     392       FAD (By similarity)   [CLFVT]-F-G-[PST]  
REGION     147     Cter       Reductase      
REGION     259     Cter       NAD or NADP-binding      
ACT_SITE     95     95       Charge relay system (By similarity)   Y  
ACT_SITE     135     135       Charge relay system (By similarity)   E  
METAL     85     85       Iron (heme proximal ligand) (By similarity)   H  
BINDING     188     188       FAD (By similarity)   Y  
SITE     29     29       Involved in heme-bound ligand stabilization and O-O bond activation (By similarity)   Y  
SITE     84     84       Influences the redox potential of the prosthetic heme and FAD groups (By similarity)   K  
SITE     388     388       Influences the redox potential of the prosthetic heme and FAD groups (By similarity)   E  


Additional information

Size range: 392-411 amino acids
Related UniRules: None
Template: P24232 (HMP_ECOLI); P39662 (HMP_RALEH); P26353 (HMP_SALTY): [Recover all]
Scope: Bacteria
Fusion: Nter: None; Cter: None
Duplicate: None
Plasmid encoded: in RALEU, RHIME

View rule in raw text format (no links)




UniProtKB rule member sequences



ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot