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UniProtKB/Swiss-Prot entry Q9XHL5


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name HMDH3_ORYSJ
Primary accession number Q9XHL5
Secondary accession number Q6Z8N5
Integrated into Swiss-Prot on December 1, 2000
Sequence was last modified on May 2, 2006 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 55)
Name and origin of the protein
Protein name 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3
Synonyms HMG-CoA reductase 3
EC 1.1.1.34
Gene name
Name: HMG3
Synonyms: HMGR3
OrderedLocusNames: Os08g0512700, LOC_Os08g40180
ORFNames: P0711H09.15
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Ha S.-H., Lee S.-W., Hwang Y.-S.;
"Isolation and characterization of two differentially expressed hydroxy-methylglutaryl-CoA reductase genes from rice.";
Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
The international rice genome sequencing project (IRGSP) consortium;
"Oryza sativa nipponbare chromosome 8 genomic DNA sequence.";
Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 95-561.
STRAIN=cv. Nipponbare;
DOI=10.1126/science.1081288; PubMed=12869764 [NCBI, ExPASy, EBI, Israel, Japan]
The rice full-length cDNA consortium;
"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.";
Science 301:376-379(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF110382; AAD38873.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP004765; BAD10066.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK060545; -; NOT_ANNOTATED_CDS; mRNA.[EMBL / GenBank / DDBJ]
3D structure databases
HSSP P04035; 1DQA. [HSSP ENTRY / PDB]
ModBase Q9XHL5.
Organism-specific databases
Gramene Q9XHL5; -.
Ontologies
GO
GO:0005789; Cellular component: endoplasmic reticulum membrane (inferred from electronic annotation from UniProtKB-SubCell).
QuickGo view.
Family and domain databases
InterPro IPR002202; HMG_CoA_Rdtase_cat.
IPR004554; HMG_CoA_Rdtase_I_cat.
Graphical view of domain structure.
Gene3D G3DSA:3.90.770.10; HMG-CoA_red; 1.
PANTHER PTHR10572; HMG-CoA_red; 1.
Pfam PF00368; HMG-CoA_red; 1.
Pfam graphical view of domain structure.
PRINTS PR00071; HMGCOARDTASE.
TIGRFAMs TIGR00533; HMG_CoA_R_NADP; 1.
PROSITE PS00066; HMG_COA_REDUCTASE_1; 1.
PS00318; HMG_COA_REDUCTASE_2; 1.
PS01192; HMG_COA_REDUCTASE_3; 1.
PS50065; HMG_COA_REDUCTASE_4; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q9XHL5.
Other
ProtoNet Q9XHL5.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Endoplasmic reticulum; Glycoprotein; Isoprene biosynthesis; Membrane; NADP; Oxidoreductase; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   561  561     3-hydroxy-3-methylglutaryl-coenzyme A reductase 3. PRO_0000114447
TRANSMEM   25    45  21     Potential. 
TRANSMEM   69    89  21     Potential. 
REGION   90   145  56     Linker (By similarity). 
REGION   146   561  416     Catalytic (By similarity). 
ACT_SITE   240   240        Charge relay system (By similarity). 
ACT_SITE   372   372        Charge relay system (By similarity). 
ACT_SITE   448   448        Charge relay system (By similarity). 
ACT_SITE   546   546        Proton donor (By similarity). 
CARBOHYD   304   304        N-linked (GlcNAc...) (Potential). 
CARBOHYD   550   550        N-linked (GlcNAc...) (Potential). 
CONFLICT   119   121        PPP -> RA (in Ref. 1; AAD38873). 
CONFLICT   345   345        V -> E (in Ref. 1; AAD38873). 
CONFLICT   538   538        A -> R (in Ref. 1; AAD38873). 
Sequence information
Length: 561 AA [This is the length of the unprocessed precursor] Molecular weight: 59401 Da [This is the MW of the unprocessed precursor] CRC64: B2A826D6A1BA0B1C [This is a checksum on the sequence]
        10         20         30         40         50         60 
MEVRRRAPLP PPPGRVQAGD ALPLPIRHTN LIFSALFAAS LAYLMRRWRE KIRSSTPLHV 

        70         80         90        100        110        120 
VGLAEMLAIF GLVASLIYLL SFFGIAFVQS IVSSSDDEEE DFLVGPARGS SAAAAVAPPP 

       130        140        150        160        170        180 
PPSSPAQCSL LGSPHDDAAR ERMPEEDEEI VSSVVAGKVP SYVLETKLGD CRRAAGIRRE 

       190        200        210        220        230        240 
AVRRITGRQI EGLPLDGFDY ASILGQCCEL PVGYVQLPVG IAGPLLLDGQ RFYVPMATTE 

       250        260        270        280        290        300 
GCLVASTNRG CKAIAESGGA VSVVLRDGMT RAPVARLPTA RRAAELKAFL EDSVNFNTLS 

       310        320        330        340        350        360 
MVFNRSSRFA RLQGVQCAMA GRNLYMRFSC CTGDAMGMNM VSKGVQNVLD YLQDDFPDMD 

       370        380        390        400        410        420 
VISISGNFCS DKKPAAVNWI EGRGKSVVCE AVIKEDVVKK VLKTNVQSLV ELNVIKNLAG 

       430        440        450        460        470        480 
SAVAGALGGF NAHASNIVTA IFIATGQDPA QNVESSHCIT MLEAVNDGRD LHISVTMPSI 

       490        500        510        520        530        540 
EVGTVGGGTQ LASQAACLDL LGVKGANRES PGSNARLLAT VVAGGVLAGE LSLLSALAAG 

       550        560 
QLVKSHMKYN RSSKDMSKVI S 

Q9XHL5 in FASTA format

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