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UniProtKB/TrEMBL entry Q9VTB8


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name Q9VTB8_DROME
Primary accession number Q9VTB8
Secondary accession numbers None
Integrated into TrEMBL on May 1, 2000
Sequence was last modified on July 5, 2004 (Sequence version 3)
Annotations were last modified on    September 23, 2008 (Entry version 43)
Name and origin of the protein
Protein name CG7958-PA, isoform A
Synonyms None
Gene name
Name: tna
ORFNames: Dmel_CG7958
From
Drosophila melanogaster (Fruit fly) [TaxID: 7227] 
Taxonomy Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley;
DOI=10.1126/science.287.5461.2185; PubMed=10731132 [NCBI, ExPASy, EBI, Israel, Japan]
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley;
PubMed=12537572 [NCBI, ExPASy, EBI, Israel, Japan]
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J., Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE014296; AAF50134.3; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_648412.2; -.
UniGene Dm.33568
3D structure databases
ModBase Q9VTB8.
Protein-protein interaction databases
IntAct Q9VTB8; -.
Organism-specific databases
FlyBase FBgn0026160; tna.
Gene expression databases
ArrayExpress Q9VTB8; -.
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
GO:0048096; Biological process: chromatin-mediated maintenance of transcription (inferred from genetic interaction from FlyBase).
QuickGo view.
Family and domain databases
InterPro IPR004181; Znf_MIZ.
Graphical view of domain structure.
Pfam PF02891; zf-MIZ; 1.
Pfam graphical view of domain structure.
PROSITE PS51044; ZF_SP_RING; 1.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
Ensembl CG7958; Drosophila melanogaster. [Contig view]
GeneID 39217; -.
KEGG dme:Dmel_CG7958; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome.
Features
None
Sequence information
Length: 1135 AA Molecular weight: 119597 Da CRC64: D7A702099719856E [This is a checksum on the sequence]
        10         20         30         40         50         60 
MQLIVDKIPM YSKQTTKRNS KKKNDEMNQQ AGSSRAPATG GQISPPGATT VGVEQQQHLQ 

        70         80         90        100        110        120 
QQHQQQYYNQ QQQQQQQQYQ QQHQRDNFLA YQQQQQQQQQ QQQQLQRSGG GGGNFMLGND 

       130        140        150        160        170        180 
LVGGDSLRSL NNTFGPNSEF TSLGGANSSA SSSLSGLSSS SSQGYTGMVA ASQQHQQQQP 

       190        200        210        220        230        240 
HHHQQQQQQQ QQQHMGSMDA MGGYSQMGGG MHPGPNSGMM GNMNGQYMNG GSGQGGYNGA 

       250        260        270        280        290        300 
QGMGMGYGGG GSMGPQRHHQ MTPMNQMQNM SMGPGVGGSG GMGGGMNPLQ QQAAQQQMGG 

       310        320        330        340        350        360 
MNPMAKMQGM ANGGYPQQAP PSLTQQQQQQ QQRRMAPYPH PQMHMAQKRA AAGVGGAGGM 

       370        380        390        400        410        420 
YPGNPMQQQQ AQMYGNQQMH PGSGGGVPLP MQAGGAGNGY GRSGPMGVGN GGYGRMSAGN 

       430        440        450        460        470        480 
GMGPTGGPVM GPMGPGGMTA GGMGPGPGCM SQQRFMPQGS GGGMPGVGYG GVGGAASHQG 

       490        500        510        520        530        540 
QFYPGSGQSA GMQQAGGMCP AGPGAVATTG NPYQNQGFQQ NYQHSPVPGN PTPPLTPACS 

       550        560        570        580        590        600 
VPYVSPNPDI KPPMDNSEEM RLTFPVRDGI ILAPFRLLHN LSVSNHVFHL KQNVYNTLMC 

       610        620        630        640        650        660 
RNDLELQLKC FHQDDRQMNT NWPHTVTVSA NATPLNIERS EKNSTALRPL YLKAVCQPGR 

       670        680        690        700        710        720 
NTLQLTASSC CCSHLFVLQL VHRPSVRQVL QTLHKRNLLP LEHSVQKIKR NLSQPEANAG 

       730        740        750        760        770        780 
PDATPQQQQQ QGGGQQCAKI SLKCPITKSR IRLPARGHEC KHVQCFDLEA YLMINSERGS 

       790        800        810        820        830        840 
WRCPECSKSA ITDTLEIDQY IWAILNTLGN SDVDEVIIDS SANWRALQHN GGMPNAPPPS 

       850        860        870        880        890        900 
NVPSNPSGGS GSNSGNGSVN PTLPVIKQEL CDDIAKVMSP GSTQLPTWDS AQAMSPYNMH 

       910        920        930        940        950        960 
DMNSIASGNM MGNGGNTNQH GNRSSYDGFS GNHSDGSGGL PGGDGGVNSL DQLNAMEKSL 

       970        980        990       1000       1010       1020 
SDQMPHTPHT PGAASHPMTP GGPPSVSSSH NEPISGGTPN ANGSGSATNG SGNNNSSTGH 

      1030       1040       1050       1060       1070       1080 
NSPQTPGTPS RMGGGMGGSG SADSQQQQQE QLLNSLMSSQ TQLKFSESDL SAELQSFDAA 

      1090       1100       1110       1120       1130 
AAAINDTAHD LNLLQDVDPM EILSYLDPQP DLNTPPSSGS SNNNASDDLL ATLFD 

Q9VTB8 in FASTA format

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View entry in raw text format (no links)
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