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UniProtKB/Swiss-Prot entry Q9LYQ2


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LAC13_ARATH
Primary accession number Q9LYQ2
Secondary accession numbers None
Integrated into Swiss-Prot on April 3, 2007
Sequence was last modified on October 1, 2000 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 41)
Name and origin of the protein
Protein name Laccase-13 [Precursor]
Synonyms EC 1.10.3.2
Benzenediol:oxygen oxidoreductase 13
Urishiol oxidase 13
Diphenol oxidase 13
Gene name
Name: LAC13
OrderedLocusNames: At5g07130
ORFNames: T28J14.70
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1038/35048507; PubMed=11130714 [NCBI, ExPASy, EBI, Israel, Japan]
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.;
"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
Nature 408:823-826(2000).
[2]
TISSUE SPECIFICITY.
DOI=10.1093/jxb/erl022; PubMed=16804053 [NCBI, ExPASy, EBI, Israel, Japan]
Cai X., Davis E.J., Ballif J., Liang M., Bushman E., Haroldsen V., Torabinejad J., Wu Y.;
"Mutant identification and characterization of the laccase gene family in Arabidopsis.";
J. Exp. Bot. 57:2563-2569(2006).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AL163652; CAB87269.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR T48484; T48484.
RefSeq NP_196330.3; -.
3D structure databases
HSSP P37064; 1AOZ. [HSSP ENTRY / PDB]
ModBase Q9LYQ2.
Organism-specific databases
TAIR At5g07130; -.
Family and domain databases
InterPro IPR001117; Cu-oxidase.
IPR011706; Cu-oxidase_2.
IPR011707; Cu-oxidase_3.
IPR002355; Cu_oxidase_Cu_BS.
IPR008972; Cupredoxin.
IPR017761; Laccase.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.420; Cupredoxin; 3.
Pfam PF00394; Cu-oxidase; 1.
PF07731; Cu-oxidase_2; 1.
PF07732; Cu-oxidase_3; 1.
Pfam graphical view of domain structure.
PROSITE PS00079; MULTICOPPER_OXIDASE1; 1.
PS00080; MULTICOPPER_OXIDASE2; 1.
BLOCKS Q9LYQ2.
Genome annotation databases
GeneID 830604; -.
GenomeReviews BA000015_GR; AT5G07130.
KEGG ath:AT5G07130; -.
NMPDR fig|3702.1.peg.22849; -.
Other
ProtoNet Q9LYQ2.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Apoplast; Complete proteome; Copper; Glycoprotein; Lignin degradation; Metal-binding; Oxidoreductase; Repeat; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    21  21     Potential. 
CHAIN   22   569  548     Laccase-13. PRO_0000283641
DOMAIN   29   145  117     Plastocyanin-like 1. 
DOMAIN   157   308  152     Plastocyanin-like 2. 
DOMAIN   418   553  136     Plastocyanin-like 3. 
METAL   79    79        Copper 1; type 2 (By similarity). 
METAL   81    81        Copper 2; type 3 (By similarity). 
METAL   124   124        Copper 2; type 3 (By similarity). 
METAL   126   126        Copper 3; type 3 (By similarity). 
METAL   470   470        Copper 4; type 1 (By similarity). 
METAL   473   473        Copper 1; type 2 (By similarity). 
METAL   475   475        Copper 3; type 3 (By similarity). 
METAL   532   532        Copper 3; type 3 (By similarity). 
METAL   533   533        Copper 4; type 1 (By similarity). 
METAL   534   534        Copper 2; type 3 (By similarity). 
METAL   538   538        Copper 4; type 1 (By similarity). 
CARBOHYD   75    75        N-linked (GlcNAc...) (Potential). 
CARBOHYD   186   186        N-linked (GlcNAc...) (Potential). 
CARBOHYD   296   296        N-linked (GlcNAc...) (Potential). 
CARBOHYD   330   330        N-linked (GlcNAc...) (Potential). 
CARBOHYD   381   381        N-linked (GlcNAc...) (Potential). 
CARBOHYD   391   391        N-linked (GlcNAc...) (Potential). 
CARBOHYD   432   432        N-linked (GlcNAc...) (Potential). 
Sequence information
Length: 569 AA [This is the length of the unprocessed precursor] Molecular weight: 63145 Da [This is the MW of the unprocessed precursor] CRC64: DB618A13E0E2881B [This is a checksum on the sequence]
        10         20         30         40         50         60 
MEQLRPFFLL LAIFVASLVN AEVHFHEFVI QETPVKRLCR VHNSITVNGQ FPGPTLEVRN 

        70         80         90        100        110        120 
GDSLVITAIN KARYNISLHW HGIRQMRNPW ADGPEYITQC PIQPGGSYTY RFTMEDQEGT 

       130        140        150        160        170        180 
LWWHAHSRWL RATVYGALII RPPLSSPHYP FPVIPKREIT LLLGEWWDRN PMDVLNLAQF 

       190        200        210        220        230        240 
TGAAPNISDA FTINGQPGDL YRCSSQETLR FLVGSGEIVL LRVINSALNQ ELFFGVANHK 

       250        260        270        280        290        300 
LTVVAADASY TKPFSTNVIM LGPGQTTDVL LTADQPPAHY YMAAHAYNSA NAAFDNTTTT 

       310        320        330        340        350        360 
AILKYKDASC VTLQAKSQAR AIPAQLPGFN DTATAAAFTA QMKSPSKVKV PLEIDENLFF 

       370        380        390        400        410        420 
TVGLGLFNCP TPNTQRCQGP NGTRFTASIN NVSFVFPKQN SIMQAYYQGT PTGVFTTDFP 

       430        440        450        460        470        480 
PTPPVTFDYT GNVSRGLWQP TRGTKAYKLK FNSQVQIILQ DTSIVTTENH PMHLHGYEFY 

       490        500        510        520        530        540 
VVGTGVGNFN PNTDTSSFNL IDPPRRNTIG TPPGGWVAIR FVANNPGAWL MHCHIDSHIF 

       550        560 
WGLAMVFLVE NGEGHLQSVQ SPPLDLPQC 

Q9LYQ2 in FASTA format

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