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UniProtKB/Swiss-Prot entry Q9FJD5


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LAC17_ARATH
Primary accession number Q9FJD5
Secondary accession numbers None
Integrated into Swiss-Prot on April 3, 2007
Sequence was last modified on March 1, 2001 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 42)
Name and origin of the protein
Protein name Laccase-17 [Precursor]
Synonyms EC 1.10.3.2
Benzenediol:oxygen oxidoreductase 17
Urishiol oxidase 17
Diphenol oxidase 17
Gene name
Name: LAC17
OrderedLocusNames: At5g60020
ORFNames: MMN10.27
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1093/dnares/5.5.297; PubMed=9872454 [NCBI, ExPASy, EBI, Israel, Japan]
Nakamura Y., Sato S., Asamizu E., Kaneko T., Kotani H., Miyajima N., Tabata S.;
"Structural analysis of Arabidopsis thaliana chromosome 5. VII. Sequence features of the regions of 1,013,767 bp covered by sixteen physically assigned P1 and TAC clones.";
DNA Res. 5:297-308(1998).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.;
"Arabidopsis ORF clones.";
Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
[3]
TISSUE SPECIFICITY.
DOI=10.1007/s00425-004-1472-6; PubMed=15940465 [NCBI, ExPASy, EBI, Israel, Japan]
McCaig B.C., Meagher R.B., Dean J.F.D.;
"Gene structure and molecular analysis of the laccase-like multicopper oxidase (LMCO) gene family in Arabidopsis thaliana.";
Planta 221:619-636(2005).
[4]
TISSUE SPECIFICITY.
DOI=10.1093/jxb/erl022; PubMed=16804053 [NCBI, ExPASy, EBI, Israel, Japan]
Cai X., Davis E.J., Ballif J., Liang M., Bushman E., Haroldsen V., Torabinejad J., Wu Y.;
"Mutant identification and characterization of the laccase gene family in Arabidopsis.";
J. Exp. Bot. 57:2563-2569(2006).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AB015475; BAB08370.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BT015359; AAU05482.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BT015890; AAU95426.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_200810.1; -.
UniGene At.7684
3D structure databases
HSSP P37064; 1AOZ. [HSSP ENTRY / PDB]
ModBase Q9FJD5.
Organism-specific databases
TAIR At5g60020; -.
Family and domain databases
InterPro IPR001117; Cu-oxidase.
IPR011706; Cu-oxidase_2.
IPR011707; Cu-oxidase_3.
IPR002355; Cu_oxidase_Cu_BS.
IPR008972; Cupredoxin.
IPR017761; Laccase.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.420; Cupredoxin; 3.
Pfam PF00394; Cu-oxidase; 1.
PF07731; Cu-oxidase_2; 1.
PF07732; Cu-oxidase_3; 1.
Pfam graphical view of domain structure.
PROSITE PS00079; MULTICOPPER_OXIDASE1; 1.
PS00080; MULTICOPPER_OXIDASE2; 1.
BLOCKS Q9FJD5.
Genome annotation databases
GeneID 836124; -.
GenomeReviews BA000015_GR; AT5G60020.
KEGG ath:AT5G60020; -.
NMPDR fig|3702.1.peg.28007; -.
Other
ProtoNet Q9FJD5.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Apoplast; Complete proteome; Copper; Glycoprotein; Lignin degradation; Metal-binding; Oxidoreductase; Repeat; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    22  22     Potential. 
CHAIN   23   577  555     Laccase-17. PRO_0000283645
DOMAIN   30   146  117     Plastocyanin-like 1. 
DOMAIN   156   309  154     Plastocyanin-like 2. 
DOMAIN   427   561  135     Plastocyanin-like 3. 
METAL   80    80        Copper 1; type 2 (By similarity). 
METAL   82    82        Copper 2; type 3 (By similarity). 
METAL   125   125        Copper 2; type 3 (By similarity). 
METAL   127   127        Copper 3; type 3 (By similarity). 
METAL   478   478        Copper 4; type 1 (By similarity). 
METAL   481   481        Copper 1; type 2 (By similarity). 
METAL   483   483        Copper 3; type 3 (By similarity). 
METAL   540   540        Copper 3; type 3 (By similarity). 
METAL   541   541        Copper 4; type 1 (By similarity). 
METAL   542   542        Copper 2; type 3 (By similarity). 
METAL   546   546        Copper 4; type 1 (By similarity). 
CARBOHYD   35    35        N-linked (GlcNAc...) (Potential). 
CARBOHYD   76    76        N-linked (GlcNAc...) (Potential). 
CARBOHYD   112   112        N-linked (GlcNAc...) (Potential). 
CARBOHYD   185   185        N-linked (GlcNAc...) (Potential). 
CARBOHYD   201   201        N-linked (GlcNAc...) (Potential). 
CARBOHYD   237   237        N-linked (GlcNAc...) (Potential). 
CARBOHYD   297   297        N-linked (GlcNAc...) (Potential). 
CARBOHYD   335   335        N-linked (GlcNAc...) (Potential). 
CARBOHYD   383   383        N-linked (GlcNAc...) (Potential). 
CARBOHYD   391   391        N-linked (GlcNAc...) (Potential). 
CARBOHYD   401   401        N-linked (GlcNAc...) (Potential). 
CARBOHYD   437   437        N-linked (GlcNAc...) (Potential). 
CARBOHYD   444   444        N-linked (GlcNAc...) (Potential). 
CARBOHYD   450   450        N-linked (GlcNAc...) (Potential). 
CARBOHYD   460   460        N-linked (GlcNAc...) (Potential). 
Sequence information
Length: 577 AA [This is the length of the unprocessed precursor] Molecular weight: 63958 Da [This is the MW of the unprocessed precursor] CRC64: 1EE10D890EF6D261 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MALQLLLAVF SCVLLLPQPA FGITRHYTLE IKMQNVTRLC HTKSLVSVNG QFPGPKLIAR 

        70         80         90        100        110        120 
EGDQVLIKVV NQVPNNISLH WHGIRQLRSG WADGPAYITQ CPIQTGQSYV YNYTIVGQRG 

       130        140        150        160        170        180 
TLWYHAHISW LRSTVYGPLI ILPKRGVPYP FAKPHKEVPM IFGEWFNADT EAIIRQATQT 

       190        200        210        220        230        240 
GGGPNVSDAY TINGLPGPLY NCSAKDTFRL RVKPGKTYLL RLINAALNDE LFFSIANHTV 

       250        260        270        280        290        300 
TVVEADAIYV KPFETETILI APGQTTNVLL KTKSSYPSAS FFMTARPYVT GQGTFDNSTV 

       310        320        330        340        350        360 
AGILEYEPPK QTKGAHSRTS IKNLQLFKPI LPALNDTNFA TKFSNKLRSL NSKNFPANVP 

       370        380        390        400        410        420 
LNVDRKFFFT VGLGTNPCNH KNNQTCQGPT NTTMFAASIS NISFTMPTKA LLQSHYSGQS 

       430        440        450        460        470        480 
HGVYSPKFPW SPIVPFNYTG TPPNNTMVSN GTNLMVLPYN TSVELVMQDT SILGAESHPL 

       490        500        510        520        530        540 
HLHGFNFFVV GQGFGNFDPN KDPRNFNLVD PIERNTVGVP SGGWAAIRFL ADNPGVWFMH 

       550        560        570 
CHLEVHTSWG LRMAWLVLDG DKPDQKLLPP PADLPKC 

Q9FJD5 in FASTA format

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