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UniProtKB/Swiss-Prot entry Q9C5R8


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name BAS1B_ARATH
Primary accession number Q9C5R8
Secondary accession numbers Q9FED5 Q9FNH9
Integrated into Swiss-Prot on April 17, 2007
Sequence was last modified on April 17, 2007 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 43)
Name and origin of the protein
Protein name 2-Cys peroxiredoxin BAS1-like, chloroplastic [Precursor]
Synonyms 2-Cys peroxiredoxin B
2-Cys Prx B
EC 1.11.1.15
Thiol-specific antioxidant protein B
Gene name
OrderedLocusNames: At5g06290
ORFNames: MHF15.19
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1093/dnares/4.4.291; PubMed=9405937 [NCBI, ExPASy, EBI, Israel, Japan]
Kotani H., Nakamura Y., Sato S., Kaneko T., Asamizu E., Miyajima N., Tabata S.;
"Structural analysis of Arabidopsis thaliana chromosome 5. II. Sequence features of the regions of 1,044,062 bp covered by thirteen physically assigned P1 clones.";
DNA Res. 4:291-300(1997).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
DOI=10.1126/science.1088305; PubMed=14593172 [NCBI, ExPASy, EBI, Israel, Japan]
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis genome.";
Science 302:842-846(2003).
[3]
INDUCTION.
DOI=10.1104/pp.010017; PubMed=12529539 [NCBI, ExPASy, EBI, Israel, Japan]
Horling F., Lamkemeyer P., Koenig J., Finkemeier I., Kandlbinder A., Baier M., Dietz K.-J.;
"Divergent light-, ascorbate-, and oxidative stress-dependent regulation of expression of the peroxiredoxin gene family in Arabidopsis.";
Plant Physiol. 131:317-325(2003).
[4]
GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
DOI=10.1016/j.freeradbiomed.2004.07.037; PubMed=15890615 [NCBI, ExPASy, EBI, Israel, Japan]
Rouhier N., Jacquot J.-P.;
"The plant multigenic family of thiol peroxidases.";
Free Radic. Biol. Med. 38:1413-1421(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AB006700; BAB08951.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF324689; AAG40040.2; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF326871; AAG41453.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF339693; AAK00375.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY054621; AAK96812.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY081503; AAM10065.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
UniGene At.7277
3D structure databases
HSSP P32119; 1QMV. [HSSP ENTRY / PDB]
ModBase Q9C5R8.
Protein family/group databases
PeroxiBase 4361; At2CysPrxB.
Organism-specific databases
TAIR At5g06290; -.
Ontologies
GO
GO:0051920; Molecular function: peroxiredoxin activity (inferred from electronic annotation from EC).
QuickGo view.
Family and domain databases
InterPro IPR000866; AhpC-TSA.
IPR012335; Thioredoxin_fold.
Graphical view of domain structure.
Gene3D G3DSA:3.40.30.10; Thioredoxin_fold; 1.
Pfam PF00578; AhpC-TSA; 1.
Pfam graphical view of domain structure.
PROSITE PS51352; THIOREDOXIN_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q9C5R8.
Genome annotation databases
GenomeReviews BA000015_GR; AT5G06290.
NMPDR fig|3702.1.peg.22752; -.
Other
ProtoNet Q9C5R8.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Antioxidant; Chloroplast; Complete proteome; Oxidoreductase; Peroxidase; Plastid; Redox-active center; Transit peptide.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
TRANSIT   1    70  70     Chloroplast (By similarity). 
CHAIN   71   271  201     2-Cys peroxiredoxin BAS1-like, chloroplastic. PRO_0000284083
DOMAIN   78   237  160     Thioredoxin. 
ACT_SITE   124   124        Cysteine sulfenic acid (-SOH) intermediate (By similarity). 
DISULFID   124   124        Interchain (with C-246); in linked form (By similarity). 
DISULFID   246   246        Interchain (with C-124); in linked form (By similarity). 
CONFLICT   215   215        T -> P (in Ref. 2; AAG40040). 
Sequence information
Length: 271 AA [This is the length of the unprocessed precursor] Molecular weight: 29562 Da [This is the MW of the unprocessed precursor] CRC64: A15B6EFC893B460B [This is a checksum on the sequence]
        10         20         30         40         50         60 
MASIASSSST TLLSSSRVLL PSKSSLLSPT VSFPRIIPSS SASSSSLCSG FSSLGSLTTN 

        70         80         90        100        110        120 
RSASRRNFAV KAQADDLPLV GNKAPDFEAE AVFDQEFIKV KLSEYIGKKY VILFFYPLDF 

       130        140        150        160        170        180 
TFVCPTEITA FSDRYEEFEK LNTEVLGVSV DSVFSHLAWV QTDRKSGGLG DLNYPLVSDI 

       190        200        210        220        230        240 
TKSISKSFGV LIPDQGIALR GLFIIDKEGV IQHSTINNLG IGRSVDETMR TLQALQYVQE 

       250        260        270 
NPDEVCPAGW KPGEKSMKPD PKLSKEYFSA I 

Q9C5R8 in FASTA format

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