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UniProtKB/Swiss-Prot entry Q941X2


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LAC3_ORYSJ
Primary accession number Q941X2
Secondary accession numbers None
Integrated into Swiss-Prot on June 26, 2007
Sequence was last modified on December 1, 2001 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 42)
Name and origin of the protein
Protein name Laccase-3 [Precursor]
Synonyms EC 1.10.3.2
Benzenediol:oxygen oxidoreductase 3
Urishiol oxidase 3
Diphenol oxidase 3
Gene name
Name: LAC3
OrderedLocusNames: Os01g0827300, LOC_Os01g61160
ORFNames: B1088C09.5
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature01184; PubMed=12447438 [NCBI, ExPASy, EBI, Israel, Japan]
Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M., Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
"The genome sequence and structure of rice chromosome 1.";
Nature 420:312-316(2002).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature03895; PubMed=16100779 [NCBI, ExPASy, EBI, Israel, Japan]
International rice genome sequencing project (IRGSP);
"The map-based sequence of the rice genome.";
Nature 436:793-800(2005).
[3]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
DOI=10.1101/gr.5509507; PubMed=17210932 [NCBI, ExPASy, EBI, Israel, Japan]
The rice annotation project (RAP);
"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.";
Genome Res. 17:175-183(2007).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Nipponbare;
DOI=10.1126/science.1081288; PubMed=12869764 [NCBI, ExPASy, EBI, Israel, Japan]
The rice full-length cDNA consortium;
"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.";
Science 301:376-379(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AP003734; BAB68098.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP008207; BAF06593.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK071929; -; NOT_ANNOTATED_CDS; mRNA.[EMBL / GenBank / DDBJ]
RefSeq NP_001044679.1; -.
UniGene Os.34310
3D structure databases
HSSP P36649; 1KV7. [HSSP ENTRY / PDB]
ModBase Q941X2.
Organism-specific databases
Gramene Q941X2; -.
Ontologies
GO
GO:0008471; Molecular function: laccase activity (inferred from electronic annotation from EC).
QuickGo view.
Family and domain databases
InterPro IPR001117; Cu-oxidase.
IPR011706; Cu-oxidase_2.
IPR011707; Cu-oxidase_3.
IPR002355; Cu_oxidase_Cu_BS.
IPR008972; Cupredoxin.
IPR017761; Laccase.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.420; Cupredoxin; 3.
Pfam PF00394; Cu-oxidase; 1.
PF07731; Cu-oxidase_2; 1.
PF07732; Cu-oxidase_3; 1.
Pfam graphical view of domain structure.
PROSITE PS00079; MULTICOPPER_OXIDASE1; 1.
PS00080; MULTICOPPER_OXIDASE2; 1.
BLOCKS Q941X2.
Genome annotation databases
GeneID 4327522; -.
KEGG osa:4327522; -.
NMPDR fig|39947.1.peg.7371; -.
Other
ProtoNet Q941X2.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Apoplast; Copper; Glycoprotein; Lignin degradation; Metal-binding; Oxidoreductase; Repeat; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    24  24     Potential. 
CHAIN   25   567  543     Laccase-3. PRO_0000291888
DOMAIN   32   148  117     Plastocyanin-like 1. 
DOMAIN   158   310  153     Plastocyanin-like 2. 
DOMAIN   415   551  137     Plastocyanin-like 3. 
METAL   82    82        Copper 1 (By similarity). 
METAL   84    84        Copper 2 (By similarity). 
METAL   127   127        Copper 2 (By similarity). 
METAL   129   129        Copper 3 (By similarity). 
METAL   468   468        Copper 4 (By similarity). 
METAL   471   471        Copper 1 (By similarity). 
METAL   473   473        Copper 3 (By similarity). 
METAL   530   530        Copper 3 (By similarity). 
METAL   531   531        Copper 4 (By similarity). 
METAL   532   532        Copper 2 (By similarity). 
METAL   536   536        Copper 4 (By similarity). 
CARBOHYD   78    78        N-linked (GlcNAc...) (Potential). 
CARBOHYD   148   148        N-linked (GlcNAc...) (Potential). 
CARBOHYD   187   187        N-linked (GlcNAc...) (Potential). 
CARBOHYD   203   203        N-linked (GlcNAc...) (Potential). 
CARBOHYD   298   298        N-linked (GlcNAc...) (Potential). 
CARBOHYD   330   330        N-linked (GlcNAc...) (Potential). 
CARBOHYD   379   379        N-linked (GlcNAc...) (Potential). 
CARBOHYD   389   389        N-linked (GlcNAc...) (Potential). 
Sequence information
Length: 567 AA [This is the length of the unprocessed precursor] Molecular weight: 62646 Da [This is the MW of the unprocessed precursor] CRC64: FA8603416C584361 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MASSSSSRLL FLLSCSVLAL LAGAEVHHHE FIVQETPVKR LCKTHNVITV NGQLPGPTLE 

        70         80         90        100        110        120 
VREGDTVVIN VVNHAQYNVT IHWHGIRQFR TGWADGPEFV TQCPIKPGGS YKYRFTIEGQ 

       130        140        150        160        170        180 
EGTLWWHAHS SWLRATVYGA LIIRPRENKT YPFEKPAREV PLILGEWWDA DPIQVIREAQ 

       190        200        210        220        230        240 
RTGAAPNISD AYTINGQPGD LYNCSKEETT AVPVKPGETA LLRFINAALN QELFVSIAQH 

       250        260        270        280        290        300 
KMTVVGVDAS YTKPFTTSVL MIAPGQTTDV LVTMDQAPTR YYLAARAYDS AQGVAFDNTT 

       310        320        330        340        350        360 
TTAVIEYDCG CATDFGPSIP PAFPVLPAFN DTNTATAFAA GIRSPHEVKI PGPVDENLFF 

       370        380        390        400        410        420 
TVGVGLFNCE PGQQCGGPNN TRFTASMNNI SFVFPQTTSL LHAHYYGIPG VFTTDFPAYP 

       430        440        450        460        470        480 
PVQFDYTAQN VPRYLWQPVP ATKLYKLKFG SVVQIVLQDT SIVSPENHPI HIHGYDFYIL 

       490        500        510        520        530        540 
AEGFGNFDPK KDAKKFNYVD PPQRNTVAVP TNGWAVIRFV ADNPGVWLMH CHLDVHITWG 

       550        560 
LAMAFLVEDG YGKLETLEAP PVDLPMC 

Q941X2 in FASTA format

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