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UniProtKB/TrEMBL entry Q93Z30


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name Q93Z30_ARATH
Primary accession number Q93Z30
Secondary accession numbers None
Integrated into TrEMBL on December 1, 2001
Sequence was last modified on December 1, 2001 (Sequence version 1)
Annotations were last modified on    December 16, 2008 (Entry version 57)
Name and origin of the protein
Protein name AT4g18950/F13C5_120 (Protein kinase-like protein)
Synonyms None
Gene name
OrderedLocusNames: At4g18950
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE.
Cheuk R., Chen H., Kim C.J., Koesema E., Meyers M.C., Banh J., Bowser L., Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Arabidopsis cDNA clones.";
Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE.
Kim C.J., Chen H., Cheuk R., Shinn P., Bowser L., Carninci P., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wallender E.K., Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Davis R.W., Theologis A., Ecker J.R.;
"Arabidopsis ORF clones.";
Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE.
PubMed=12093376 [NCBI, ExPASy, EBI, Israel, Japan]
Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.;
"Full-length messenger RNA sequences greatly improve genome annotation.";
Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002).
[4]
NUCLEOTIDE SEQUENCE.
Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.;
"Features of Arabidopsis genes and genome discovered using full-length cDNAs.";
Plant Mol. Biol. 60:71-87(2006).
[5]
NUCLEOTIDE SEQUENCE.
Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.;
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AY058189; AAL25602.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY087826; AAM65379.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY142014; AAM98278.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_567568.1; -.
3D structure databases
HSSP P00523; 2PTK. [HSSP ENTRY / PDB]
ModBase Q93Z30.
Protein-protein interaction databases
IntAct Q93Z30; 8.
Organism-specific databases
TAIR At4g18950; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from direct assay from TAIR).
GO:0005634; Cellular component: nucleus (inferred from direct assay from TAIR).
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
InterPro IPR002110; ANK.
IPR016253; Integrin-linked_kinase.
IPR000719; Prot_kinase_core.
IPR001245; Tyr_pkinase.
Graphical view of domain structure.
Gene3D G3DSA:1.25.40.20; ANK; 1.
Pfam PF00023; Ank; 3.
PF07714; Pkinase_Tyr; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000654; Integrin-linked_kinase; 1.
PRINTS PR00109; TYRKINASE.
ProDom PD000001; Prot_kinase; 1.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00248; ANK; 3.
SMART graphical view of domain structure.
PROSITE PS50297; ANK_REP_REGION; 1.
PS50088; ANK_REPEAT; 2.
PS50011; PROTEIN_KINASE_DOM; 1.
PROSITE graphical view of domain structure (profiles).
Proteomics databases
PRIDE Q93Z30; -.
Genome annotation databases
GeneID 827630; -.
KEGG ath:AT4G18950; -.
NMPDR fig|3702.1.peg.19703; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Kinase.
Features
None
Sequence information
Length: 459 AA Molecular weight: 52618 Da CRC64: 837CA5E952252E02 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MEEDYQQPRF TIGRQSSMAP EKIPEPSVHS EEEVFEDGEE IDGGVRLMYL ANEGDIEGIK 

        70         80         90        100        110        120 
ELIDSGIDAN YRDIDDRTAL HVAACQGLKD VVELLLDRKA EVDPKDRWGS TPFADAIFYK 

       130        140        150        160        170        180 
NIDVIKILEI HGAKHPMAPM HVKTAREVPE YEINPSELDF TQSKEITKGT YCMAMWRGIQ 

       190        200        210        220        230        240 
VAVKKLDDEV LSDDDQVRKF HDELALLQRL RHPNIVQFLG AVTQSNPMMI VTEYLPRGDL 

       250        260        270        280        290        300 
RELLKRKGQL KPATAVRYAL DIARGMSYLH EIKGDPIIHR DLEPSNILRD DSGHLKVADF 

       310        320        330        340        350        360 
GVSKLVTVKE DKPFTCQDIS CRYIAPEVFT SEEYDTKADV FSFALIVQEM IEGRMPFAEK 

       370        380        390        400        410        420 
EDSEASEAYA GKHRPLFKAP SKNYPHGLKT LIEECWHEKP AKRPTFREII KRLESILHHM 

       430        440        450 
GHKRQWRMRP LTCFQNFEHK KKHNWDLSSH DGSSSGSHL 

Q93Z30 in FASTA format

View entry in original UniProtKB/TrEMBL format
View entry in raw text format (no links)
Request for annotation of this UniProtKB/TrEMBL entry

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