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UniProtKB/Swiss-Prot entry Q93SN8


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PEBA_PROMP
Primary accession number Q93SN8
Secondary accession numbers None
Integrated into Swiss-Prot on February 12, 2003
Sequence was last modified on September 19, 2003 (Sequence version 2)
Annotations were last modified on    November 25, 2008 (Entry version 41)
Name and origin of the protein
Protein name 15,16-dihydrobiliverdin:ferredoxin oxidoreductase
Synonym EC 1.3.7.2
Gene name
Name: pebA
OrderedLocusNames: PMM1593
From
Prochlorococcus marinus subsp. pastoris (strain CCMP1378 / MED4) [TaxID: 59919] [HAMAP proteome]
Taxonomy Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1105/tpc.13.4.965; PubMed=11283349 [NCBI, ExPASy, EBI, Israel, Japan]
Frankenberg N., Mukougawa K., Kohchi T., Lagarias J.C.;
"Functional genomic analysis of the HY2 family of ferredoxin-dependent bilin reductases from oxygenic photosynthetic organisms.";
Plant Cell 13:965-978(2001).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1038/nature01947; PubMed=12917642 [NCBI, ExPASy, EBI, Israel, Japan]
Rocap G., Larimer F.W., Lamerdin J.E., Malfatti S., Chain P., Ahlgren N.A., Arellano A., Coleman M., Hauser L., Hess W.R., Johnson Z.I., Land M.L., Lindell D., Post A.F., Regala W., Shah M., Shaw S.L., Steglich C., Sullivan M.B., Ting C.S., Tolonen A., Webb E.A., Zinser E.R., Chisholm S.W.;
"Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation.";
Nature 424:1042-1047(2003).
Comments
  • FUNCTION: Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge.
  • CATALYTIC ACTIVITY: 15,16-dihydrobiliverdin + oxidized ferredoxin = biliverdin IX-alpha + reduced ferredoxin.
  • SIMILARITY: Belongs to the HY2 family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AY030300; AAK38141.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BX548174; CAE20052.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_893710.1; -.
3D structure databases
ModBase Q93SN8.
Enzyme and pathway databases
BioCyc PMAR167540:PMM1593-MON; -.
Ontologies
GO
GO:0050617; Molecular function: 15,16-dihydrobiliverdin:ferredoxin oxidoreductase activity (inferred from electronic annotation from HAMAP).
GO:0050897; Molecular function: cobalt ion binding (inferred from electronic annotation from InterPro).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0010024; Biological process: phytochromobilin biosynthetic process (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
HAMAP MF_00792; -; 1.
PBIL [Tree]
InterPro IPR009249; Fe_bilin_red.
Graphical view of domain structure.
Pfam PF05996; Fe_bilin_red; 1.
Pfam graphical view of domain structure.
Genome annotation databases
GeneID 1726360; -.
GenomeReviews BX548174_GR; PMM1593.
KEGG pmm:PMM1593; -.
NMPDR fig|59919.1.peg.1589; -.
Phylogenomic databases
HOGENOM Q93SN8; -.
Genome annotation databases
CMR Q93SN8; PMM1593.
Other
ProtoNet Q93SN8.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom  To Length Description FTId
CHAIN   1   236  236     15,16-dihydrobiliverdin:ferredoxin oxidoreductase. PRO_0000216728
CONFLICT   47    47        Q -> R (in Ref. 1; AAK38141). 
Sequence information
Length: 236 AA [This is the length of the unprocessed precursor] Molecular weight: 28340 Da [This is the MW of the unprocessed precursor] CRC64: D4F215B59B1282D2 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MFESLKNFVK TNIEDLDGKE LEISKEFKEH HNKDSKYIIK NWIFESQQYR KWRITKLDGG 

        70         80         90        100        110        120 
DKLQVFNTVA YPNFKSEFPI LGADILWFGT SQKLLAIFDY QPLIQEKKYL QKYCSSLDFI 

       130        140        150        160        170        180 
KNQYSVFDNH KMKNIYDSKK YFSPWVMICR GNKLNLDRDL NNIFCSFVSN YLTINKLHQN 

       190        200        210        220        230 
NQFLDLEQIK NNQIDYDKYS AEKDPADKLF KTFFGETWTE NFINNFLFTL NHNPLK 

Q93SN8 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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