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UniProtKB/Swiss-Prot entry Q7MF12

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name BETA_VIBVY
Primary accession number Q7MF12
Secondary accession numbers None
Integrated into Swiss-Prot on February 16, 2004
Sequence was last modified on December 15, 2003 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 32)
Name and origin of the protein
Protein name Choline dehydrogenase
Synonyms CHD
CDH
EC 1.1.99.1
Gene name
Name: betA
OrderedLocusNames: VVA0508
From
Vibrio vulnificus (strain YJ016) [TaxID: 196600] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1101/gr.1295503; PubMed=14656965 [NCBI, ExPASy, EBI, Israel, Japan]
Chen C.-Y., Wu K.-M., Chang Y.-C., Chang C.-H., Tsai H.-C., Liao T.-L., Liu Y.-M., Chen H.-J., Shen A.B.-T., Li J.-C., Su T.-L., Shao C.-P., Lee C.-T., Hor L.-I., Tsai S.-F.;
"Comparative genome analysis of Vibrio vulnificus, a marine pathogen.";
Genome Res. 13:2577-2587(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BA000038; BAC96534.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_936564.1; -.
3D structure databases
ModBase Q7MF12.
Enzyme and pathway databases
BioCyc VVUL196600:VVA0508-MON; -.
Ontologies
GO
GO:0008812; Molecular function: choline dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0019285; Biological process: glycine betaine biosynthetic process from choline (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00750; -; 1.
PBIL [Tree]
InterPro IPR011533; Choline_dehydrogenase.
IPR012132; GMC_OxRdtase.
IPR000172; GMC_OxRdtase_N.
IPR007867; GMC_OxRtase_C.
Graphical view of domain structure.
Pfam PF05199; GMC_oxred_C; 1.
PF00732; GMC_oxred_N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000137; Alcohol_oxidase; 1.
TIGRFAMs TIGR01810; betA; 1.
PROSITE PS00623; GMC_OXRED_1; 1.
PS00624; GMC_OXRED_2; FALSE_NEG.
BLOCKS Q7MF12.
Genome annotation databases
GeneID 2621166; -.
GenomeReviews BA000038_GR; VVA0508.
KEGG vvy:VVA0508; -.
NMPDR fig|196600.1.peg.3835; -.
Phylogenomic databases
HOGENOM Q7MF12; -.
Genome annotation databases
CMR Q7MF12; VVA0508.
Other
ProtoNet Q7MF12.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   560  560     Choline dehydrogenase. PRO_0000205607
NP_BIND   6    35  30     FAD (Probable). 
ACT_SITE   470   470        By similarity. 
Sequence information
Length: 560 AA [This is the length of the unprocessed precursor] Molecular weight: 62359 Da [This is the MW of the unprocessed precursor] CRC64: 9CCA2CBA8EEA613B [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MQQHYDYIIV GAGSAGCVLA DRLSESGDHS VLLLEAGGSD KSIFIQMPTA LSYPMNSEKY 

        70         80         90        100        110        120 
AWQFETDAEA DLDGRRLHCP RGKVLGGSSS INGMVYVRGH ACDFDEWEEQ GAKGWNYQAC 

       130        140        150        160        170        180 
LPYFRRAENW IDGEDEYRGG DGPLSTCAGN KMTLNPLYRA FIDAGKEAGY PETSDYNGYQ 

       190        200        210        220        230        240 
QEGFGPMHMT VKNGVRASTS NAYLSRAKKR SNFKLIKGVV VQRILLEEKR AVGVEFELAG 

       250        260        270        280        290        300 
ELRTCFAKNE VISSAGSIGS VQLLQLSGIG PKTVLEKAGV TPVYHLPGVG QNLQDHLEVY 

       310        320        330        340        350        360 
FQYHCQKPIT LNGKLDWFSK GLIGTEWILT RKGLGATNHF ESCAFIRSRA GLKWPNIQYH 

       370        380        390        400        410        420 
FLPAAMRYDG QAAFDGHGFQ VHVGPNKPES RGRVEIVSAN PLDKPKIQFN YLSTERDRQD 

       430        440        450        460        470        480 
WRDCIRLTRE ILAQPAMDEF RGEEIQPGIN VATDAEIDQW VKENVESAYH PSCSCKMGAD 

       490        500        510        520        530        540 
DDPMAVLDEE CRVRGITNLR VVDSSVFPTI PNGNLNAPTI MVAERAADLI LHKQPLPPQR 

       550        560 
SKVWLAPSWE TQQRTGEPMR
Q7MF12 in FASTA format

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