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UniProtKB/Swiss-Prot entry Q708Y0


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name EBF2_ARATH
Primary accession number Q708Y0
Secondary accession numbers None
Integrated into Swiss-Prot on January 23, 2007
Sequence was last modified on July 5, 2004 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 43)
Name and origin of the protein
Protein name EIN3-binding F-box protein 2
Synonyms None
Gene name
Name: EBF2
OrderedLocusNames: At5g25350
ORFNames: F18G18.90
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], FUNCTION, INDUCTION, TISSUE SPECIFICITY, SUBCELLULAR LOCATION, AND INTERACTION WITH CUL1; SKP1A/ASK1; SKP1B/ASK2; EIN3 AND EIL1.
DOI=10.1016/S0092-8674(03)00968-1; PubMed=14675533 [NCBI, ExPASy, EBI, Israel, Japan]
Potuschak T., Lechner E., Parmentier Y., Yanagisawa S., Grava S., Koncz C., Genschik P.;
"EIN3-dependent regulation of plant ethylene hormone signaling by two Arabidopsis F box proteins: EBF1 and EBF2.";
Cell 115:679-689(2003).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1038/35048507; PubMed=11130714 [NCBI, ExPASy, EBI, Israel, Japan]
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.;
"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
Nature 408:823-826(2000).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.;
"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AJ609239; CAE75865.1; -; Genomic_RNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY485830; AAR27072.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AC006258; -; NOT_ANNOTATED_CDS; Genomic_DNA.[EMBL / GenBank / DDBJ]
AK227858; BAE99835.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_197917.1; -.
UniGene At.19865
3D structure databases
ModBase Q708Y0.
Protein-protein interaction databases
IntAct Q708Y0; -.
Organism-specific databases
TAIR At5g25350; -.
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
InterPro IPR001810; F-box.
IPR001611; LRR.
IPR006553; LRR_cys_sub-typ.
Graphical view of domain structure.
Pfam PF00646; F-box; 1.
PF00560; LRR_1; 3.
Pfam graphical view of domain structure.
SMART SM00256; FBOX; 1.
SM00367; LRR_CC; 1.
SMART graphical view of domain structure.
PROSITE PS50181; FBOX; FALSE_NEG.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q708Y0.
Genome annotation databases
GeneID 832607; -.
GenomeReviews BA000015_GR; AT5G25350.
KEGG ath:AT5G25350; -.
NMPDR fig|3702.1.peg.24733; -.
Other
ProtoNet Q708Y0.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Ethylene signaling pathway; Leucine-rich repeat; Nucleus; Repeat; Ubl conjugation pathway.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   623  623     EIN3-binding F-box protein 2. PRO_0000272246
DOMAIN   52   106  55     F-box. 
REPEAT   69    86  18     LRR 1. 
REPEAT   87   138  52     LRR 2. 
REPEAT   139   166  28     LRR 3. 
REPEAT   167   193  27     LRR 4. 
REPEAT   194   236  43     LRR 5. 
REPEAT   237   263  27     LRR 6. 
REPEAT   264   287  24     LRR 7. 
REPEAT   288   312  25     LRR 8. 
REPEAT   313   341  29     LRR 9. 
REPEAT   342   367  26     LRR 10. 
REPEAT   368   392  25     LRR 11. 
REPEAT   393   448  56     LRR 12. 
REPEAT   449   475  27     LRR 13. 
REPEAT   476   503  28     LRR 14. 
REPEAT   504   525  22     LRR 15. 
REPEAT   526   549  24     LRR 16. 
Sequence information
Length: 623 AA [This is the length of the unprocessed precursor] Molecular weight: 66061 Da [This is the MW of the unprocessed precursor] CRC64: 990E2D9B098A11B6 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSGIFRFSGD EDCLLGGSMY LSPGSCPGVY YPARKRLRVA ATSFYSGFEE KQTSIDVLPE 

        70         80         90        100        110        120 
ECLFEILRRL PSGQERSACA CVSKHWLNLL SSISRSEVNE SSVQDVEEGE GFLSRSLEGK 

       130        140        150        160        170        180 
KATDLRLAAI AVGTSSRGGL GKLQIRGSGF ESKVTDVGLG AVAHGCPSLR IVSLWNLPAV 

       190        200        210        220        230        240 
SDLGLSEIAR SCPMIEKLDL SRCPGITDSG LVAIAENCVN LSDLTIDSCS GVGNEGLRAI 

       250        260        270        280        290        300 
ARRCVNLRSI SIRSCPRIGD QGVAFLLAQA GSYLTKVKLQ MLNVSGLSLA VIGHYGAAVT 

       310        320        330        340        350        360 
DLVLHGLQGV NEKGFWVMGN AKGLKKLKSL SVMSCRGMTD VGLEAVGNGC PDLKHVSLNK 

       370        380        390        400        410        420 
CLLVSGKGLV ALAKSALSLE SLKLEECHRI NQFGLMGFLM NCGSKLKAFS LANCLGISDF 

       430        440        450        460        470        480 
NSESSLPSPS CSSLRSLSIR CCPGFGDASL AFLGKFCHQL QDVELCGLNG VTDAGVRELL 

       490        500        510        520        530        540 
QSNNVGLVKV NLSECINVSD NTVSAISVCH GRTLESLNLD GCKNITNASL VAVAKNCYSV 

       550        560        570        580        590        600 
NDLDISNTLV SDHGIKALAS SPNHLNLQVL SIGGCSSITD KSKACIQKLG RTLLGLNIQR 

       610        620 
CGRISSSTVD TLLENLWRCD ILY 

Q708Y0 in FASTA format

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