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UniProtKB/Swiss-Prot entry Q6ZJJ1


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name APX4_ORYSJ
Primary accession number Q6ZJJ1
Secondary accession numbers None
Integrated into Swiss-Prot on October 25, 2005
Sequence was last modified on July 5, 2004 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 32)
Name and origin of the protein
Protein name Probable L-ascorbate peroxidase 4
Synonyms EC 1.11.1.11
OsAPx04
Gene name
Name: APX4
OrderedLocusNames: Os08g0549100, LOC_Os08g43560
ORFNames: OJ1479_B11.9
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
The international rice genome sequencing project (IRGSP) consortium;
"Oryza sativa nipponbare chromosome 8 genomic DNA sequence.";
Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Nipponbare;
DOI=10.1126/science.1081288; PubMed=12869764 [NCBI, ExPASy, EBI, Israel, Japan]
The rice full-length cDNA consortium;
"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.";
Science 301:376-379(2003).
[3]
NOMENCLATURE.
DOI=10.1007/s00239-004-2666-z; PubMed=15599508 [NCBI, ExPASy, EBI, Israel, Japan]
Teixeira F.K., Menezes-Benavente L., Margis R., Margis-Pinheiro M.;
"Analysis of the molecular evolutionary history of the ascorbate peroxidase gene family: inferences from the rice genome.";
J. Mol. Evol. 59:761-770(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AP003912; BAD08951.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK070842; -; NOT_ANNOTATED_CDS; mRNA.[EMBL / GenBank / DDBJ]
RefSeq NP_001062439.1; -.
UniGene Os.10609
3D structure databases
HSSP P48534; 1APX. [HSSP ENTRY / PDB]
ModBase Q6ZJJ1.
Protein family/group databases
PeroxiBase 1868; OsAPx04.
Organism-specific databases
Gramene Q6ZJJ1; -.
Family and domain databases
InterPro IPR002207; Asc_perxdse.
IPR002016; Haem_peroxidase_pln/fun/bac.
Graphical view of domain structure.
Pfam PF00141; peroxidase; 1.
Pfam graphical view of domain structure.
PRINTS PR00459; ASPEROXIDASE.
PR00458; PEROXIDASE.
PROSITE PS00435; PEROXIDASE_1; 1.
PS00436; PEROXIDASE_2; 1.
PS50873; PEROXIDASE_4; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q6ZJJ1.
Genome annotation databases
GeneID 4346247; -.
KEGG osa:4346247; -.
Other
ProtoNet Q6ZJJ1.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Heme; Hydrogen peroxide; Iron; Membrane; Metal-binding; Oxidoreductase; Peroxidase; Potassium; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   291  291     Probable L-ascorbate peroxidase 4. PRO_0000055596
TRANSMEM   263   283  21     Potential. 
ACT_SITE   40    40        Proton acceptor (By similarity). 
METAL   160   160        Iron (heme axial ligand) (By similarity). 
METAL   161   161        Potassium or calcium (By similarity). 
METAL   177   177        Potassium or calcium (By similarity). 
METAL   184   184        Potassium or calcium (By similarity). 
SITE   36    36  1     Transition state stabilizer (By similarity). 
Sequence information
Length: 291 AA [This is the length of the unprocessed precursor] Molecular weight: 31738 Da [This is the MW of the unprocessed precursor] CRC64: 5B605C442EB57807 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAAPVVDAEY LRQVDRARRH LRALISSKGC APIMLRLAWH DAGTYDVNTK TGGANGSIRY 

        70         80         90        100        110        120 
EEEYTHGSNA GLKIAIDLLE PIKAKSPKIT YADLYQLAGV VAVEVTGGPT VEFIPGRRDS 

       130        140        150        160        170        180 
SVCPREGRLP DAKKGALHLR DIFYRMGLSD KDIVALSGGH TLGRAHPERS GFEGAWTQEP 

       190        200        210        220        230        240 
LKFDNSYFLE LLKGESEGLL KLPTDKALLE DPSFRRYVDL YARDEDTFFK DYAESHKKLS 

       250        260        270        280        290 
ELGFTPRSSG PASTKSDLST GAVLAQSAVG VAVAAAVVIV SYLYEASKKS K 

Q6ZJJ1 in FASTA format

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