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UniProtKB/Swiss-Prot entry Q6LGH5

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name BETA_PHOPR
Primary accession number Q6LGH5
Secondary accession numbers None
Integrated into Swiss-Prot on October 31, 2006
Sequence was last modified on July 5, 2004 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 30)
Name and origin of the protein
Protein name Choline dehydrogenase
Synonyms CHD
CDH
EC 1.1.99.1
Gene name
Name: betA
OrderedLocusNames: PBPRB1745
From
Photobacterium profundum (Photobacterium sp. (strain SS9)) [TaxID: 74109] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1126/science.1103341; PubMed=15746425 [NCBI, ExPASy, EBI, Israel, Japan]
Vezzi A., Campanaro S., D'Angelo M., Simonato F., Vitulo N., Lauro F.M., Cestaro A., Malacrida G., Simionati B., Cannata N., Romualdi C., Bartlett D.H., Valle G.;
"Life at depth: Photobacterium profundum genome sequence and expression analysis.";
Science 307:1459-1461(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CR378680; CAG23605.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_133405.1; -.
3D structure databases
ModBase Q6LGH5.
Enzyme and pathway databases
BioCyc PPRO298386:PBPRB1745-MON; -.
Ontologies
GO
GO:0008812; Molecular function: choline dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0019285; Biological process: glycine betaine biosynthetic process from choline (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00750; -; 1.
PBIL [Tree]
InterPro IPR011533; Choline_dehydrogenase.
IPR012132; GMC_OxRdtase.
IPR000172; GMC_OxRdtase_N.
IPR007867; GMC_OxRtase_C.
Graphical view of domain structure.
Pfam PF05199; GMC_oxred_C; 1.
PF00732; GMC_oxred_N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000137; Alcohol_oxidase; 1.
TIGRFAMs TIGR01810; betA; 1.
PROSITE PS00623; GMC_OXRED_1; 1.
PS00624; GMC_OXRED_2; 1.
BLOCKS Q6LGH5.
Genome annotation databases
GeneID 3121754; -.
GenomeReviews CR354532_GR; PBPRB1745.
KEGG ppr:PBPRB1745; -.
NMPDR fig|298386.1.peg.1866; -.
Phylogenomic databases
HOGENOM Q6LGH5; -.
Genome annotation databases
CMR Q6LGH5; PBPRB1745.
Other
ProtoNet Q6LGH5.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   568  568     Choline dehydrogenase. PRO_0000258927
NP_BIND   6    35  30     FAD (Probable). 
ACT_SITE   470   470        By similarity. 
Sequence information
Length: 568 AA [This is the length of the unprocessed precursor] Molecular weight: 62698 Da [This is the MW of the unprocessed precursor] CRC64: F0017136A0C40B0C [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MNTTYDYIIV GAGSAGCVLA DRLSASGEHY ILLLEAGGSD RSIFIQMPTA LSYPMNSEKY 

        70         80         90        100        110        120 
AWQFETQPEA GLDSRSLHCP RGRVLGGSSS INGMVYVRGH ACDYDEWVEQ GAEGWSYQEC 

       130        140        150        160        170        180 
LPYFRRAESW IHGEDTYRGG DGPVGTCNGN DMELNPLYQA FIDAGQQAGY PKTDDYNGYQ 

       190        200        210        220        230        240 
QEGFGPMHMT VDKGIRASTS NAYLRRAMKR SNLTVRKGVV TRKVLIKNKQ AIGVEIEVGG 

       250        260        270        280        290        300 
KVQSVYANTE VLLSAGSVGS PQLLQLSGIG PKAVLEQAGI AVKHDLPGVG ENLQDHLEVY 

       310        320        330        340        350        360 
FQYACHQPIT LNSKLGLISK GLIGTRWILQ KDGLGATNHF ESCAFIRSRA GLKWPNIQYH 

       370        380        390        400        410        420 
FLPAAMRYDG QAAFDGHGFQ VHVGPNKPQS RGRIWITSAD PHQKPNIEFN YISTEQDKQD 

       430        440        450        460        470        480 
WRDCIRLTRE ILAQPAMDDY RGEEIQPGAD ITSDEAMDAW VRQNVESAYH PSCTCKMGSD 

       490        500        510        520        530        540 
NDPMTVLNKD CQVRGIDSLR VIDSSVFPTI PNGNLNAPTI MVAEKAADAI LGNTPLSPSN 

       550        560 
APTWIAPQWE TEQRNGAAQR PMFHQQRK
Q6LGH5 in FASTA format

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