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UniProtKB/Swiss-Prot entry Q6FPL6


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name JHD1_CANGA
Primary accession number Q6FPL6
Secondary accession numbers None
Integrated into Swiss-Prot on March 7, 2006
Sequence was last modified on July 19, 2004 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 26)
Name and origin of the protein
Protein name JmjC domain-containing histone demethylation protein 1
Synonyms EC 1.14.11.27
[Histone-H3]-lysine-36 demethylase 1
Gene name
Name: JHD1
OrderedLocusNames: CAGL0J02860g
From
Candida glabrata (Yeast) (Torulopsis glabrata) [TaxID: 5478] 
Taxonomy Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; mitosporic Saccharomycetales; Candida.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 2001 / CBS 138 / IFO 0622 / NRRL Y-65;
DOI=10.1038/nature02579; PubMed=15229592 [NCBI, ExPASy, EBI, Israel, Japan]
Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S., Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F., Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M., Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J., Wincker P., Souciet J.-L.;
"Genome evolution in yeasts.";
Nature 430:35-44(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CR380956; CAG60777.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq XP_447828.1; -.
3D structure databases
ModBase Q6FPL6.
Family and domain databases
InterPro IPR003347; TF_JmjC_AAH.
Graphical view of domain structure.
SMART SM00558; JmjC; 1.
SMART graphical view of domain structure.
PROSITE PS51184; JMJC; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q6FPL6.
Genome annotation databases
GeneID 2889738; -.
KEGG cgr:CAGL0J02860g; -.
Phylogenomic databases
HOGENOM Q6FPL6; -.
Other
ProtoNet Q6FPL6.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Chromatin regulator; Complete proteome; Dioxygenase; Iron; Metal-binding; Nucleus; Oxidoreductase; Transcription; Transcription regulation.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   403  403     JmjC domain-containing histone demethylation protein 1. PRO_0000226794
DOMAIN   141   328  188     JmjC. 
METAL   224   224        Iron; catalytic (By similarity). 
METAL   226   226        Iron; catalytic (By similarity). 
METAL   296   296        Iron; catalytic (By similarity). 
BINDING   221   221        Substrate (By similarity). 
BINDING   241   241        Substrate (By similarity). 
Sequence information
Length: 403 AA [This is the length of the unprocessed precursor] Molecular weight: 47030 Da [This is the MW of the unprocessed precursor] CRC64: F327A0D7EB1217BD [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAVKIEQALG EKRSLNDNDE VPRKKRYNFR KKVELDYSAL NEGEDKKSKF FHPHIALFEK 

        70         80         90        100        110        120 
EFEKCLSNVT EDMSMTCSEY CKRFDDIDFP LKISDPENSG MVVSTNNKTT RDLTVDDITQ 

       130        140        150        160        170        180 
AVGDDYFVNV MDVQSQENER WSLREWCNYF NKPAEEKDRI RNVISLEVSH VEDLQYDRPD 

       190        200        210        220        230        240 
IVDDKDLVDI VWNNVENLDT ENDPRPKVTK YCLMSVKNAF TDYHLDFAGT SVYYNLAFGK 

       250        260        270        280        290        300 
KKFILYPPTP ENIENYIEWS TSTYQNMLFL GEKLTGGVAM ELNGGDLFMI PSGYIHVVYT 

       310        320        330        340        350        360 
PEDSLIFGGN YLTFRDISQQ LKIVDVEKQT GVTKRYTFPM FDEVMGRTCE WLCQNQKKGK 

       370        380        390        400 
QMQVKKETVN DLISYMKSGK TKYKPTNFIN KKQMLQELSN LYL 

Q6FPL6 in FASTA format

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