ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q6FDF9

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name BETA_ACIAD
Primary accession number Q6FDF9
Secondary accession numbers None
Integrated into Swiss-Prot on October 31, 2006
Sequence was last modified on July 19, 2004 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 34)
Name and origin of the protein
Protein name Choline dehydrogenase
Synonyms CHD
CDH
EC 1.1.99.1
Gene name
Name: betA
OrderedLocusNames: ACIAD1008
From
Acinetobacter sp. (strain ADP1) [TaxID: 62977] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1093/nar/gkh910; PubMed=15514110 [NCBI, ExPASy, EBI, Israel, Japan]
Barbe V., Vallenet D., Fonknechten N., Kreimeyer A., Oztas S., Labarre L., Cruveiller S., Robert C., Duprat S., Wincker P., Ornston L.N., Weissenbach J., Marliere P., Cohen G.N., Medigue C.;
"Unique features revealed by the genome sequence of Acinetobacter sp. ADP1, a versatile and naturally transformation competent bacterium.";
Nucleic Acids Res. 32:5766-5779(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CR543861; CAG67899.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_045721.1; -.
3D structure databases
ModBase Q6FDF9.
Enzyme and pathway databases
BioCyc ASP62977:ACIAD1008-MON; -.
Ontologies
GO
GO:0008812; Molecular function: choline dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0019285; Biological process: glycine betaine biosynthetic process from choline (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00750; -; 1.
PBIL [Tree]
InterPro IPR011533; Choline_dehydrogenase.
IPR012132; GMC_OxRdtase.
IPR000172; GMC_OxRdtase_N.
IPR007867; GMC_OxRtase_C.
Graphical view of domain structure.
Pfam PF05199; GMC_oxred_C; 1.
PF00732; GMC_oxred_N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000137; Alcohol_oxidase; 1.
TIGRFAMs TIGR01810; betA; 1.
PROSITE PS00623; GMC_OXRED_1; 1.
PS00624; GMC_OXRED_2; 1.
BLOCKS Q6FDF9.
Genome annotation databases
GeneID 2880313; -.
GenomeReviews CR543861_GR; ACIAD1008.
KEGG aci:ACIAD1008; -.
NMPDR fig|62977.3.peg.1059; -.
Phylogenomic databases
HOGENOM Q6FDF9; -.
Genome annotation databases
CMR Q6FDF9; ACIAD1008.
Other
ProtoNet Q6FDF9.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   553  553     Choline dehydrogenase. PRO_0000258916
NP_BIND   7    36  30     FAD (Probable). 
ACT_SITE   477   477        By similarity. 
Sequence information
Length: 553 AA [This is the length of the unprocessed precursor] Molecular weight: 61478 Da [This is the MW of the unprocessed precursor] CRC64: 7598EDF99C03839C [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MTTQTFDYII IGAGSAGNVL AARLTEDADV SVLLLEAGGP DYRLDFRTQM PAALAYPLQG 

        70         80         90        100        110        120 
RRYNWAYLTE PEPHMNNRRM ECGRGKGLGG SSLINGMCYI RGNAMDLEGW SKLKGLENWT 

       130        140        150        160        170        180 
YADCLPYYKK AETRDIGGND YHGDHGPVSV ATPKDNNNVL FHAMVEAGVQ AGYPRTDDLN 

       190        200        210        220        230        240 
GYQQEGFGPM DRTVTKNGRR SSTARGYLDM AKERPNLTII THAMTNKILF NGKQAIGVEY 

       250        260        270        280        290        300 
IQGADKRDLK KVMANKEVLL CAGAIASPQI LQRSGVGEST FLKSMDIDVV HDLPGVGENL 

       310        320        330        340        350        360 
QDHLEMYLQY KCKQPVSLYP ALKWYNQPAI GAEWLFLGKG IGASNQFEAG GFIRSSDEFE 

       370        380        390        400        410        420 
WPNIQYHFLP VAINYNGSNA VKEHGFQAHV GSMRSPSRGH IKLKSKDPFE HPSILFNYMS 

       430        440        450        460        470        480 
TEQDWQEFRA AIRITREIMH QPALDPYRGE EISPGKQLST DTQLDDFVRN HAETAYHPSC 

       490        500        510        520        530        540 
SCKMGEDDMA VVDHQGRVHG LQGLRVVDAS IMPLIITGNL NATTIMMAEK IADQIRERAP 

       550 
LPRSDAPFYV ASA
Q6FDF9 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA) 		Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Hosted by kr flag YPRC Korea Mirror sites: Australia Brazil Canada China Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!