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UniProtKB/Swiss-Prot entry Q6D6D9

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name BETA_ERWCT
Primary accession number Q6D6D9
Secondary accession numbers None
Integrated into Swiss-Prot on October 31, 2006
Sequence was last modified on August 16, 2004 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 31)
Name and origin of the protein
Protein name Choline dehydrogenase
Synonyms CHD
CDH
EC 1.1.99.1
Gene name
Name: betA
OrderedLocusNames: ECA1746
From
Erwinia carotovora subsp. atroseptica (Pectobacterium atrosepticum) [TaxID: 29471] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SCRI 1043 / ATCC BAA-672;
DOI=10.1073/pnas.0402424101; PubMed=15263089 [NCBI, ExPASy, EBI, Israel, Japan]
Bell K.S., Sebaihia M., Pritchard L., Holden M.T.G., Hyman L.J., Holeva M.C., Thomson N.R., Bentley S.D., Churcher L.J.C., Mungall K., Atkin R., Bason N., Brooks K., Chillingworth T., Clark K., Doggett J., Fraser A., Hance Z., Hauser H., Jagels K., Moule S., Norbertczak H., Ormond D., Price C., Quail M.A., Sanders M., Walker D., Whitehead S., Salmond G.P.C., Birch P.R.J., Parkhill J., Toth I.K.;
"Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp. atroseptica and characterization of virulence factors.";
Proc. Natl. Acad. Sci. U.S.A. 101:11105-11110(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BX950851; CAG74651.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_049846.1; -.
3D structure databases
ModBase Q6D6D9.
Enzyme and pathway databases
BioCyc ECAR218491:ECA1746-MON; -.
Ontologies
GO
GO:0008812; Molecular function: choline dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0019285; Biological process: glycine betaine biosynthetic process from choline (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00750; -; 1.
PBIL [Tree]
InterPro IPR011533; Choline_dehydrogenase.
IPR012132; GMC_OxRdtase.
IPR000172; GMC_OxRdtase_N.
IPR007867; GMC_OxRtase_C.
Graphical view of domain structure.
Pfam PF05199; GMC_oxred_C; 1.
PF00732; GMC_oxred_N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000137; Alcohol_oxidase; 1.
TIGRFAMs TIGR01810; betA; 1.
PROSITE PS00623; GMC_OXRED_1; 1.
PS00624; GMC_OXRED_2; 1.
BLOCKS Q6D6D9.
Genome annotation databases
GeneID 2882565; -.
GenomeReviews BX950851_GR; ECA1746.
KEGG eca:ECA1746; -.
NMPDR fig|218491.3.peg.216; -.
Phylogenomic databases
HOGENOM Q6D6D9; -.
Genome annotation databases
CMR Q6D6D9; ECA1746.
Other
ProtoNet Q6D6D9.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   559  559     Choline dehydrogenase. PRO_0000258924
NP_BIND   4    33  30     FAD (Probable). 
ACT_SITE   471   471        By similarity. 
Sequence information
Length: 559 AA [This is the length of the unprocessed precursor] Molecular weight: 62102 Da [This is the MW of the unprocessed precursor] CRC64: E7BD0CA73F8D314A [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MEYDYIIIGA GSAGNVLAAR LTEESDVSVL LLEAGGPDYR LDFRTQMPAA LAFPLQGKRY 

        70         80         90        100        110        120 
NWAYETDPEP HMNDRRMECG RGKGLGGSSL INGMCYIRGN AMDFDHWATM SGLEDWSYLD 

       130        140        150        160        170        180 
CLPYFRKAET RDVGANDYHG ASGPVSVTTP KMGNNELFHA MVEAGVQAGY PRTDDLNGYQ 

       190        200        210        220        230        240 
QEGFGPMDRT VTPKGRRAST ARGYLDQAKS RKNLTIVTHA LTDRILFDGK RAVGVAYFKG 

       250        260        270        280        290        300 
ESAQTAKARR EVLLCAGAIA SPQILQRSGV GPKDLLQRLD ISVVHDLPGV GENLQDHLEM 

       310        320        330        340        350        360 
YLQYACKEPV SLYPALQWFN QPKIGAEWLF NGTGIGASNQ FEAGGFIRSR DEFTWPNIQY 

       370        380        390        400        410        420 
HFLPVAINYN GSNAVKEHGF QAHVGSMRSL SRGRVQVRSK DAREHPSILF NYMSTEQDWQ 

       430        440        450        460        470        480 
EFRDAIRITR EIMAQPALDK YRGREISPGL AVQTDEELDE FIRTHAETAF HPSCSCKMGE 

       490        500        510        520        530        540 
DDMSVVDGQG CVHGMEGLRV VDASIMPQII TGNLNATTIM IAEKIADRIR RRQPLPRSKA 

       550 
RYYVAGSTPV RKAPLKPAS
Q6D6D9 in FASTA format

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