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UniProtKB/Swiss-Prot entry Q6AY30


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name SCPDH_RAT
Primary accession number Q6AY30
Secondary accession numbers None
Integrated into Swiss-Prot on August 30, 2005
Sequence was last modified on September 13, 2004 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 33)
Name and origin of the protein
Protein name Probable saccharopine dehydrogenase
Synonym EC 1.5.1.9
Gene name
Name: Sccpdh
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Testis;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BC079215; AAH79215.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001014007.1; -.
UniGene Rn.23989
3D structure databases
ModBase Q6AY30.
Organism-specific databases
RGD 1311440; Sccpdh.
Gene expression databases
ArrayExpress Q6AY30; -.
GermOnline ENSRNOG00000037984; Rattus norvegicus.
Family and domain databases
InterPro IPR016040; NAD(P)-bd.
IPR005097; Saccharopine_DHase.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 1.
Pfam PF03435; Saccharop_dh; 1.
Pfam graphical view of domain structure.
BLOCKS Q6AY30.
Genome annotation databases
Ensembl ENSRNOG00000037984; Rattus norvegicus. [Contig view]
GeneID 305021; -.
KEGG rno:305021; -.
NMPDR fig|10116.3.peg.9663; -.
Phylogenomic databases
HOVERGEN Q6AY30; -.
Other
ProtoNet Q6AY30.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
NAD; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   429  429     Probable saccharopine dehydrogenase. PRO_0000212843
Sequence information
Length: 429 AA [This is the length of the unprocessed precursor] Molecular weight: 47088 Da [This is the MW of the unprocessed precursor] CRC64: D16F3BE0BBF8D300 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MATEQRPFQL VVFGASGFTG QFVTEEVARE QMASEQSSRL PWAVAGRSKE KLQQVLEKAA 

        70         80         90        100        110        120 
QKLGRATLSS EVGIIICDIS NPASLDEMAK KATLVLNCVG PYRFYGEPVV KACIENGTSC 

       130        140        150        160        170        180 
IDICGEPQFL ELMHVKYHEK AAEKGVYIIG SSGFDSIPAD LGVLYTRNQM NGTLTAVESF 

       190        200        210        220        230        240 
LTINSGPEGL CIHDGTWKSA IYGFGDKGSL RKLRSVSNLK PVPVIGSKLK RRWPVSYCRE 

       250        260        270        280        290        300 
LNSYAIPFLG SDMSVVKRTQ RYLHENLEDS PVQYAAYITV GGITSVIKLM FAGLFFLFFV 

       310        320        330        340        350        360 
KFSIGRQLLV KFPWLFSFGY FSKRGPTQKQ MDESSFTMTF FGQGYSHGVS AEKNKPNIRI 

       370        380        390        400        410        420 
CTQVKGPEAG YVATPIAMVQ AAVTFLNDAS DLPKGGGVFT PGAAFSRTKL IDRLNQHGIQ 


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Q6AY30 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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