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UniProtKB/Swiss-Prot entry Q60338


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name FRHA_METJA
Primary accession number Q60338
Secondary accession numbers None
Integrated into Swiss-Prot on November 1, 1997
Sequence was last modified on November 1, 1997 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 48)
Name and origin of the protein
Protein name Coenzyme F420 hydrogenase subunit alpha
Synonyms EC 1.12.98.1
8-hydroxy-5-deazaflavin-reducing hydrogenase subunit alpha
FRH
Gene name
Name: frhA
OrderedLocusNames: MJ0029
From
Methanocaldococcus jannaschii (Methanococcus jannaschii) [TaxID: 2190] [HAMAP proteome]
Taxonomy Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440;
PubMed=8688087 [NCBI, ExPASy, EBI, Israel, Japan]
Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G., Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R., Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R., Kirkness E.F., Weinstock K.G., Merrick J.M., Glodek A., Scott J.L., Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R., Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D., Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P., Fraser C.M., Smith H.O., Woese C.R., Venter J.C.;
"Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii.";
Science 273:1058-1073(1996).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
L77117; -; NOT_ANNOTATED_CDS; Genomic_DNA.[EMBL / GenBank / DDBJ]
PIR A64299; A64299.
3D structure databases
HSSP P13065; 1CC1. [HSSP ENTRY / PDB]
ModBase Q60338.
Family and domain databases
InterPro IPR017682; Coenz_F420_hydrogenase_asu.
IPR001501; Ni-dep_hyd_lsu.
Graphical view of domain structure.
Pfam PF00374; NiFeSe_Hases; 1.
Pfam graphical view of domain structure.
PROSITE PS00507; NI_HGENASE_L_1; 1.
PS00508; NI_HGENASE_L_2; 1.
BLOCKS Q60338.
Genome annotation databases
KEGG mja:MJ0029; -.
TIGR MJ0029; -.
Phylogenomic databases
HOGENOM Q60338; -.
Other
ProtoNet Q60338.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Metal-binding; Nickel; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   415  415     Coenzyme F420 hydrogenase subunit alpha. PRO_0000199722
METAL   68    68        Nickel (Potential). 
METAL   71    71        Nickel (Potential). 
METAL   391   391        Nickel (Potential). 
METAL   394   394        Nickel (Potential). 
Sequence information
Length: 415 AA [This is the length of the unprocessed precursor] Molecular weight: 46784 Da [This is the MW of the unprocessed precursor] CRC64: 8DD9A94CBABE35C4 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MEVNFVTNRI EIAPTTRHEG HAKLILEVDE EGIVNKAYYL NTTPVRGFET MLKGKPAEFA 

        70         80         90        100        110        120 
PIAVMRICGI CQTTHGIASC EAIENAIDCE VPDDGLLLRE LVGIGNRLHS HPLHHLLTID 

       130        140        150        160        170        180 
DFLKPDETDL KIELIKLIQR MRKVGQLVVD IVGGEGIHPP NIVIGGMRTN ITERAKSRLY 

       190        200        210        220        230        240 
YALRQYEKDA YELYEKYTEL IERYLEEIGI PDLGAHEYPY IATHTTYGDR YAINWDDVTE 

       250        260        270        280        290        300 
IPAQRYYDDE EAKQTTTIQI PLYAGVPAEG GPRARMVKFG NFREGGSAMD INIARAQENL 

       310        320        330        340        350        360 
GAVYRALEIL DELDLNGKTR AEVEYKDGFG IGVHEAPRAT NTHMAEVGKD GKIKSYRIIA 

       370        380        390        400        410 
ASTWNFPIVE KAIEGYPQQY AEVIMRAYDI CASCATHVIV KDEETKEIIE VRKML 

Q60338 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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