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UniProtKB/Swiss-Prot entry Q5ZCW1


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LAC1_ORYSJ
Primary accession number Q5ZCW1
Secondary accession number A2ZTA7
Integrated into Swiss-Prot on June 26, 2007
Sequence was last modified on November 23, 2004 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 32)
Name and origin of the protein
Protein name Putative laccase-1 [Precursor]
Synonyms EC 1.10.3.2
Benzenediol:oxygen oxidoreductase 1
Urishiol oxidase 1
Diphenol oxidase 1
Gene name
Name: LAC1
OrderedLocusNames: Os01g0374600, LOC_Os01g27700
ORFNames: B1045D11.30, OsJ_001779
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature01184; PubMed=12447438 [NCBI, ExPASy, EBI, Israel, Japan]
Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M., Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
"The genome sequence and structure of rice chromosome 1.";
Nature 420:312-316(2002).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature03895; PubMed=16100779 [NCBI, ExPASy, EBI, Israel, Japan]
International rice genome sequencing project (IRGSP);
"The map-based sequence of the rice genome.";
Nature 436:793-800(2005).
[3]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
DOI=10.1101/gr.5509507; PubMed=17210932 [NCBI, ExPASy, EBI, Israel, Japan]
The rice annotation project (RAP);
"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.";
Genome Res. 17:175-183(2007).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1371/journal.pbio.0030038; PubMed=15685292 [NCBI, ExPASy, EBI, Israel, Japan]
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
"The genomes of Oryza sativa: a history of duplications.";
PLoS Biol. 3:266-281(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AP003199; BAD61379.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP008207; BAF04988.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CM000138; EAZ11954.1; ALT_SEQ; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001043074.1; -.
UniGene Os.72229
3D structure databases
ModBase Q5ZCW1.
Organism-specific databases
Gramene Q5ZCW1; -.
Family and domain databases
InterPro IPR001117; Cu-oxidase.
IPR011706; Cu-oxidase_2.
IPR011707; Cu-oxidase_3.
IPR002355; Cu_oxidase_Cu_BS.
IPR008972; Cupredoxin.
IPR017761; Laccase.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.420; Cupredoxin; 3.
Pfam PF00394; Cu-oxidase; 1.
PF07731; Cu-oxidase_2; 1.
PF07732; Cu-oxidase_3; 1.
Pfam graphical view of domain structure.
PROSITE PS00079; MULTICOPPER_OXIDASE1; 1.
PS00080; MULTICOPPER_OXIDASE2; 1.
BLOCKS Q5ZCW1.
Genome annotation databases
GeneID 4325440; -.
KEGG osa:4325440; -.
Other
ProtoNet Q5ZCW1.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Apoplast; Copper; Glycoprotein; Lignin degradation; Metal-binding; Oxidoreductase; Repeat; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    28  28     Potential. 
CHAIN   29   577  549     Putative laccase-1. PRO_0000291886
DOMAIN   37   153  117     Plastocyanin-like 1. 
DOMAIN   163   316  154     Plastocyanin-like 2. 
DOMAIN   442   561  120     Plastocyanin-like 3. 
METAL   87    87        Copper 1 (By similarity). 
METAL   89    89        Copper 2 (By similarity). 
METAL   132   132        Copper 2 (By similarity). 
METAL   134   134        Copper 3 (By similarity). 
METAL   478   478        Copper 4 (By similarity). 
METAL   481   481        Copper 1 (By similarity). 
METAL   483   483        Copper 3 (By similarity). 
METAL   540   540        Copper 3 (By similarity). 
METAL   541   541        Copper 4 (By similarity). 
METAL   542   542        Copper 2 (By similarity). 
METAL   546   546        Copper 4 (By similarity). 
METAL   551   551        Copper 4 (By similarity). 
CARBOHYD   42    42        N-linked (GlcNAc...) (Potential). 
CARBOHYD   83    83        N-linked (GlcNAc...) (Potential). 
CARBOHYD   115   115        N-linked (GlcNAc...) (Potential). 
CARBOHYD   276   276        N-linked (GlcNAc...) (Potential). 
CARBOHYD   304   304        N-linked (GlcNAc...) (Potential). 
CARBOHYD   382   382        N-linked (GlcNAc...) (Potential). 
CARBOHYD   402   402        N-linked (GlcNAc...) (Potential). 
Sequence information
Length: 577 AA [This is the length of the unprocessed precursor] Molecular weight: 64530 Da [This is the MW of the unprocessed precursor] CRC64: A803FB6E25D34495 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MGTAKIPALL WFLLAGLVLA LAVNPAHGAK TRHYDFFITE TNYTRLCHEK SILTVNGQFP 

        70         80         90        100        110        120 
GPTIYARKGD FIIVNVHNNG NKNITIHWHG VDQPRNPWSD GPEFITQCPI RPGGNFTYQV 

       130        140        150        160        170        180 
ILFEEEGTLW WHAHSDFDRA TVHGAIVIHP KRGTTFLFRK LDKEIPWWND DVEHVLDKAK 

       190        200        210        220        230        240 
RIGGDVEPSD TNTINGQPGD MFPLCSRDDT FKVAVQQGNT YLLRVINAGL TNDMFFAIAG 

       250        260        270        280        290        300 
HRLTVVGIDA RYTKPITVDY IMIAPGQTMD VLLKANRTLG SNSRYYMAAR TFITLPVDTI 

       310        320        330        340        350        360 
RFNNSTATAI VEYTDSAVAR PVGPPEFPVL LPAIKDEDAA MAFVKQLRSL GNQDHPVHVP 

       370        380        390        400        410        420 
KQVDEHMLID IDINFLPCDA NNATNKLCEG PQGNRFAASL NNVSFQNPAI DVLDAYYYGS 

       430        440        450        460        470        480 
GRGVYEENFP NKLTVIVNPT GDINGGGPLL TKRGTKVKVL EYGTVVEVVF QDLSIENHPM 

       490        500        510        520        530        540 
HLHGFTFYVV GRGSGTFDER RDPATYNLID PPFQNTVSVP KSSWAAIRFR ADNPGVWFMH 

       550        560        570 
CHFDRHVVWG MDTMFIVKDG KTPQAQMLPR PPNMPEC 

Q5ZCW1 in FASTA format

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