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UniProtKB/Swiss-Prot entry Q5N7A3


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LAC6_ORYSJ
Primary accession number Q5N7A3
Secondary accession numbers None
Integrated into Swiss-Prot on June 26, 2007
Sequence was last modified on February 1, 2005 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 27)
Name and origin of the protein
Protein name Laccase-6 [Precursor]
Synonyms EC 1.10.3.2
Benzenediol:oxygen oxidoreductase 6
Urishiol oxidase 6
Diphenol oxidase 6
Gene name
Name: LAC6
OrderedLocusNames: LOC_Os01g63180
ORFNames: P0529H11.21, OsJ_003986
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature01184; PubMed=12447438 [NCBI, ExPASy, EBI, Israel, Japan]
Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M., Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
"The genome sequence and structure of rice chromosome 1.";
Nature 420:312-316(2002).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1371/journal.pbio.0030038; PubMed=15685292 [NCBI, ExPASy, EBI, Israel, Japan]
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
"The genomes of Oryza sativa: a history of duplications.";
PLoS Biol. 3:266-281(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AP003242; BAD81778.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP004072; BAD82646.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CM000138; EAZ14161.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
ModBase Q5N7A3.
Organism-specific databases
Gramene Q5N7A3; -.
Ontologies
GO
GO:0008471; Molecular function: laccase activity (inferred from electronic annotation from EC).
QuickGo view.
Family and domain databases
InterPro IPR001117; Cu-oxidase.
IPR011706; Cu-oxidase_2.
IPR011707; Cu-oxidase_3.
IPR002355; Cu_oxidase_Cu_BS.
IPR008972; Cupredoxin.
IPR017761; Laccase.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.420; Cupredoxin; 3.
Pfam PF00394; Cu-oxidase; 1.
PF07731; Cu-oxidase_2; 1.
PF07732; Cu-oxidase_3; 1.
Pfam graphical view of domain structure.
PROSITE PS00079; MULTICOPPER_OXIDASE1; 1.
PS00080; MULTICOPPER_OXIDASE2; 1.
BLOCKS Q5N7A3.
Other
ProtoNet Q5N7A3.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Apoplast; Copper; Glycoprotein; Lignin degradation; Metal-binding; Oxidoreductase; Repeat; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    22  22     Potential. 
CHAIN   23   580  558     Laccase-6. PRO_0000291891
DOMAIN   30   148  119     Plastocyanin-like 1. 
DOMAIN   158   317  160     Plastocyanin-like 2. 
DOMAIN   424   564  141     Plastocyanin-like 3. 
METAL   82    82        Copper 1 (By similarity). 
METAL   84    84        Copper 2 (By similarity). 
METAL   127   127        Copper 2 (By similarity). 
METAL   129   129        Copper 3 (By similarity). 
METAL   480   480        Copper 4 (By similarity). 
METAL   483   483        Copper 1 (By similarity). 
METAL   485   485        Copper 3 (By similarity). 
METAL   543   543        Copper 3 (By similarity). 
METAL   544   544        Copper 4 (By similarity). 
METAL   545   545        Copper 2 (By similarity). 
METAL   549   549        Copper 4 (By similarity). 
CARBOHYD   44    44        N-linked (GlcNAc...) (Potential). 
CARBOHYD   78    78        N-linked (GlcNAc...) (Potential). 
CARBOHYD   306   306        N-linked (GlcNAc...) (Potential). 
CARBOHYD   335   335        N-linked (GlcNAc...) (Potential). 
CARBOHYD   385   385        N-linked (GlcNAc...) (Potential). 
CARBOHYD   397   397        N-linked (GlcNAc...) (Potential). 
CARBOHYD   462   462        N-linked (GlcNAc...) (Potential). 
Sequence information
Length: 580 AA [This is the length of the unprocessed precursor] Molecular weight: 62569 Da [This is the MW of the unprocessed precursor] CRC64: C920CD4B9452D017 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSCSWMIPVF AILAFVASAA QADVVEHTFN VATLSLPRIC QPGNTSVTAV NGRVPGPQVE 

        70         80         90        100        110        120 
AREGDTVVIH VINDSPYNVT VHWHGVFQRG TPWADGPAMV TQCPIRPGHR YTYRFAVAGQ 

       130        140        150        160        170        180 
EGTLWWHAHS SYMRATVYGA LVIRPRRAGG YPFPTPYEEK TVLLGEWWNG DPVALESQSF 

       190        200        210        220        230        240 
STGIPAPNAD AYTINGMPGD SYLCPETTNR IAKFEVRRDK TYLLRIINAA LNTAFFFKVA 

       250        260        270        280        290        300 
GHTFTVVAAD ASYTEPYATD VIVIAPGQTV DALMAADASP GCYHMAISSY QSAIPFPPRP 

       310        320        330        340        350        360 
AGFNGNTSTA IVEYVDATAT TDAGSPVLPV MPKPNDTYTA NQFYTSLTAL IRPGRRTVPL 

       370        380        390        400        410        420 
TVDTRMLVTV GLGFSSCQPE QTQCNRSAPV VLANMNNVSF ALPNTVSMLE ALYRNTADGV 

       430        440        450        460        470        480 
YTRDFPDQPP VAFDYTSRGL LGNSPLASTG SPSTKVKTLR YNATVEMVLQ NTALVGLESH 

       490        500        510        520        530        540 
PMHLHGFNFF VVAQGFGNND GEAAGAGEFN LVNPQERNTV AVPTGGWAVI RFVADNPGMW 

       550        560        570        580 
AMHCHIDSHF AIGLAMVFEV ESGPTPGTTL PPPPPDLPQC 

Q5N7A3 in FASTA format

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