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UniProtKB/Swiss-Prot entry Q5A847

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name JHD1_CANAL
Primary accession number Q5A847
Secondary accession numbers None
Integrated into Swiss-Prot on March 7, 2006
Sequence was last modified on April 26, 2005 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 26)
Name and origin of the protein
Protein name JmjC domain-containing histone demethylation protein 1
Synonyms EC 1.14.11.27
[Histone-H3]-lysine-36 demethylase 1
Gene name
Name: JHD1
ORFNames: CaO19.3281, CaO19.10791
From
Candida albicans (Yeast) [TaxID: 5476] 
Taxonomy Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; mitosporic Saccharomycetales; Candida.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SC5314;
DOI=10.1073/pnas.0401648101; PubMed=15123810 [NCBI, ExPASy, EBI, Israel, Japan]
Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B., Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W., Scherer S.;
"The diploid genome sequence of Candida albicans.";
Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AACQ01000049; EAK98956.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AACQ01000048; EAK99023.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq XP_717905.1; -.
XP_717971.1; -.
3D structure databases
ModBase Q5A847.
Organism-specific databases
CGD CAL0003411; orf19.3281.
Family and domain databases
InterPro IPR013129; TF_JmjC.
IPR003347; TF_JmjC_AAH.
IPR001965; Znf_PHD.
IPR013083; Znf_RING/FYVE/PHD.
Graphical view of domain structure.
Gene3D G3DSA:3.30.40.10; Znf_RING/FYVE/PHD; 1.
Pfam PF02373; JmjC; 1.
PF00628; PHD; 1.
Pfam graphical view of domain structure.
SMART SM00558; JmjC; 1.
SM00249; PHD; 1.
SMART graphical view of domain structure.
PROSITE PS51184; JMJC; 1.
PS01359; ZF_PHD_1; 1.
PS50016; ZF_PHD_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q5A847.
Genome annotation databases
GeneID 3640438; -.
3640450; -.
KEGG cal:CaO19.10791; -.
cal:CaO19.3281; -.
Other
ProtoNet Q5A847.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Chromatin regulator; Dioxygenase; Iron; Metal-binding; Nucleus; Oxidoreductase; Transcription; Transcription regulation; Zinc; Zinc-finger.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   478  478     JmjC domain-containing histone demethylation protein 1. PRO_0000226793
DOMAIN   217   383  167     JmjC. 
ZN_FING   5    68  64     PHD-type. 
METAL   269   269        Iron; catalytic (By similarity). 
METAL   271   271        Iron; catalytic (By similarity). 
METAL   351   351        Iron; catalytic (By similarity). 
BINDING   266   266        Substrate (By similarity). 
BINDING   286   286        Substrate (By similarity). 
Sequence information
Length: 478 AA [This is the length of the unprocessed precursor] Molecular weight: 55460 Da [This is the MW of the unprocessed precursor] CRC64: 5DA6D1654795CF5D [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MPINSESCPL CKVHSNTIKK EDEDEEDNKT SWIQCSKCKV WYHVHCLDLP TDEIDQIVIY 

        70         80         90        100        110        120 
HCPECVPKYG ESTYKRKSKR ARVSIDYQSL NEGDTFAIDK SSHFHLHNFL NFKGETNINV 

       130        140        150        160        170        180 
IDKLTKTYAL NTQMEKPILI PQADLSKNGM QLPIEKNEIT IDYITDCCGE DTPLEVMDVI 

       190        200        210        220        230        240 
SQQGISPPWK LKQWREYFKT NEEKRDRIRN VISLEISDVA KLGVDFTRPK CVRDMDVVDR 

       250        260        270        280        290        300 
VWIEEDEQKR SKVTKYCLMS VKNSFTDFHI DFGGTSVYYT VLSGAKTFLF FPPTDNNLEL 

       310        320        330        340        350        360 
YKSWCLEPSQ NFIWYPEYTI TKNKKKIKPT GGFKVDLQPG DLFIIPSGWI HAVHTPQDSI 

       370        380        390        400        410        420 
VIGGNYLTIR DMVMQLKINE IERETKVPTK FRFPMFNKVL WLTAWYYYNH QNEFQSDIGE 

       430        440        450        460        470 
DEDGNAILTR LIGHLQGHLE LSKTNATAKR SIPKTIGKPM VFINKLLAWK EDLYGTAV
Q5A847 in FASTA format

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