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UniProtKB/Swiss-Prot entry Q56304


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DHE3_THELI
Primary accession number Q56304
Secondary accession number Q9UWK7
Integrated into Swiss-Prot on December 15, 1998
Sequence was last modified on January 23, 2007 (Sequence version 3)
Annotations were last modified on    September 2, 2008 (Entry version 53)
Name and origin of the protein
Protein name Glutamate dehydrogenase
Synonyms GDH
EC 1.4.1.3
Gene name
Name: gdhA
From
Thermococcus litoralis [TaxID: 2265] 
Taxonomy Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Borges K.M., Diruggiero J., Robb F.T.;
"Cloning and sequencing of glutamate dehydrogenases from hyperthermophilic archaea.";
Submitted (JUN-1993) to the EMBL/GenBank/DDBJ databases.
[2]
PROTEIN SEQUENCE OF 2-21, AND SUBCELLULAR LOCATION.
STRAIN=DSM 5473;
PubMed=8135516 [NCBI, ExPASy, EBI, Israel, Japan]
Ma K., Robb F.T., Adams M.W.W.;
"Purification and characterization of NADP-specific alcohol dehydrogenase and glutamate dehydrogenase from the hyperthermophilic archaeon Thermococcus litoralis.";
Appl. Environ. Microbiol. 60:562-568(1994).
[3]
SUBUNIT, AND X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS).
DOI=10.1006/jmbi.1999.3205; PubMed=10547290 [NCBI, ExPASy, EBI, Israel, Japan]
Britton K.L., Yip K.S.P., Sedelnikova S.E., Stillman T.J., Adams M.W.W., Ma K., Maeder D.L., Robb F.T., Tolliday N., Vetriani C., Rice D.W., Baker P.J.;
"Structure determination of the glutamate dehydrogenase from the hyperthermophile Thermococcus litoralis and its comparison with that from Pyrococcus furiosus.";
J. Mol. Biol. 293:1121-1132(1999).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
L19995; AAA72393.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
PDB
1BVU; X-ray; 2.50 A; A/B/C/D/E/F=1-419.[ExPASy / RCSB / EBI]
PDBsum 1BVU; -.
ModBase Q56304.
Family and domain databases
InterPro IPR006095; Glu/Leu/Phe/Val_DHase.
IPR006096; Glu/Leu/Phe/Val_DHase_C.
IPR006097; Glu/Leu/Phe/Val_DHase_dimer.
IPR014362; Glu_DHase.
IPR016040; NAD(P)-bd.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 1.
PANTHER PTHR11606:SF2; GLFV_DH; 1.
Pfam PF00208; ELFV_dehydrog; 1.
PF02812; ELFV_dehydrog_N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000185; Glu_DH; 1.
PRINTS PR00082; GLFDHDRGNASE.
PROSITE PS00074; GLFV_DEHYDROGENASE; 1.
BLOCKS Q56304.
Other
ProtoNet Q56304.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Cytoplasm; Direct protein sequencing; NAD; NADP; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed. 
CHAIN   2   419  418     Glutamate dehydrogenase. PRO_0000182762
NP_BIND   219   225  7     NAD (Potential). 
ACT_SITE   105   105        By similarity. 
HELIX   5    18  14      
HELIX   25    30  6      
STRAND   35    45  11      
STRAND   51    62  12      
STRAND   66    69  4      
STRAND   72    75  4      
HELIX   80    97  18      
STRAND   102   110  9      
HELIX   112   114  3      
HELIX   117   131  15      
HELIX   132   134  3      
TURN   137   139  3      
HELIX   150   164  15      
HELIX   170   173  4      
STRAND   174   176  3      
HELIX   179   181  3      
HELIX   190   205  16      
STRAND   214   218  5      
HELIX   222   235  14      
STRAND   238   243  6      
STRAND   248   250  3      
HELIX   257   267  11      
STRAND   268   270  3      
STRAND   277   279  3      
HELIX   281   286  6      
STRAND   290   294  5      
HELIX   303   306  4      
STRAND   312   315  4      
STRAND   318   320  3      
HELIX   324   333  10      
STRAND   336   338  3      
HELIX   340   343  4      
HELIX   346   360  15      
HELIX   366   391  26      
HELIX   395   414  20      
Sequence information
Length: 419 AA [This is the length of the unprocessed precursor] Molecular weight: 46740 Da [This is the MW of the unprocessed precursor] CRC64: 2768747A590B71F6 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MVEQDPFEIA VKQLERAAQY MDISEEALEF LKRPQRIVEV SIPVEMDDGS VKVFTGFRVQ 

        70         80         90        100        110        120 
YNWARGPTKG GIRWHPEETL STVKALAAWM TWKTAVMDLP YGGGKGGVIC NPKEMSDREK 

       130        140        150        160        170        180 
ERLARGYVRA IYDVISPYTD IPAPDVYTNP QIMAWMMDEY ETISRRKDPS FGVITGKPPS 

       190        200        210        220        230        240 
VGGIVARMDA TARGASYTVR EAAKALGMDL KGKTIAIQGY GNAGYYMAKI MSEEYGMKVV 

       250        260        270        280        290        300 
AVSDTKGGIY NPDGLNADEV LAWKKKTGSV KDFPGATNIT NEELLELEVD VLAPSAIEEV 

       310        320        330        340        350        360 
ITKKNADNIK AKIVAELANG PTTPEADEIL YEKGILIIPD FLCNAGGVTV SYFEWVQNIT 

       370        380        390        400        410 
GDYWTVEETR AKLDKKMTKA FWDVYNTHKE KNINMRDAAY VVAVSRVYQA MKDRGWIKK 

Q56304 in FASTA format

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