ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q55DT8


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name ARGD_DICDI
Primary accession number Q55DT8
Secondary accession numbers None
Integrated into Swiss-Prot on April 8, 2008
Sequence was last modified on May 24, 2005 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 32)
Name and origin of the protein
Protein name Probable acetylornithine aminotransferase, mitochondrial [Precursor]
Synonyms ACOAT
EC 2.6.1.11
Gene name
Name: argD
Synonyms: arg8
ORFNames: DDB_G0269526
From
Dictyostelium discoideum (Slime mold) [TaxID: 44689] 
Taxonomy Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=AX4;
DOI=10.1038/nature03481; PubMed=15875012 [NCBI, ExPASy, EBI, Israel, Japan]
Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
"The genome of the social amoeba Dictyostelium discoideum.";
Nature 435:43-57(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AAFI02000005; EAL72113.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq XP_646043.1; -.
3D structure databases
ModBase Q55DT8.
Organism-specific databases
dictyBase DDB0231481; argD.
Ontologies
GO
GO:0005759; Cellular component: mitochondrial matrix (inferred from electronic annotation from UniProtKB-SubCell).
GO:0003992; Molecular function: acetylornithine transaminase activity (inferred from electronic annotation from EC).
GO:0030170; Molecular function: pyridoxal phosphate binding (inferred from electronic annotation from InterPro).
GO:0006526; Biological process: arginine biosynthetic process (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR005814; Aminotrans_3.
IPR004636; ArgD_aminotrans.
IPR015421; PyrdxlP-dep_Trfase_major_sub1.
Graphical view of domain structure.
Gene3D G3DSA:3.40.640.10; PyrdxlP-dep_Trfase_major_sub1; 1.
PANTHER PTHR11986; Aminotrans_3; 1.
PTHR11986:SF19; ArgD_aminotrans; 1.
Pfam PF00202; Aminotran_3; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR00707; argD; 1.
PROSITE PS00600; AA_TRANSFER_CLASS_3; 1.
ProtoNet Q55DT8.
Genome annotation databases
GeneID 3397143; -.
KEGG ddi:DDB_0231481; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Amino-acid biosynthesis; Aminotransferase; Arginine biosynthesis; Complete proteome; Mitochondrion; Pyridoxal phosphate; Transferase; Transit peptide.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
TRANSIT   1     ?        Mitochondrion (Potential). 
CHAIN   ?   453        Probable acetylornithine aminotransferase, mitochondrial. PRO_0000327776
BINDING   302   302        Pyridoxal phosphate (covalent) (By similarity). 
Sequence information
Length: 453 AA [This is the length of the unprocessed precursor] Molecular weight: 50122 Da [This is the MW of the unprocessed precursor] CRC64: 4328E466B96BCDFD [This is a checksum on the sequence]
        10         20         30         40         50         60 
MFNKLNKINK IKNCFNKSIY QINYSSKPIF KEGITNVKLD RDNKDGTSDY IKLHDNVIMN 

        70         80         90        100        110        120 
TYGRVSDIVF THGKDSWLYD MKGDKYLDFG AGIAVNALGH SNDGWSEVVA NQSKKLTHLS 

       130        140        150        160        170        180 
NLYYNQPAIE LAQSMIASTP IFDKVFFANS GTEANEAALK FAKKIGIAKG GVDKHEIIAF 

       190        200        210        220        230        240 
SHGFSGRSMG SLSCTHKSKY REIYGPLVPG VHFAEYNDIE SVKKLMSKSK TCAVIIEPVQ 

       250        260        270        280        290        300 
GEGGLEAATV EFMQQLYKLC KENDCLLIVD EVQCGIGRTG QLWAHTRFDT EKCKPDIMTL 

       310        320        330        340        350        360 
AKPLAGGLPI GAVLVSDKVA SEIKPGDHGT TFGGGPLVCE VGKYVFERIS QPSFLKEVQE 

       370        380        390        400        410        420 
KGKYLTDGLK KLKDQFPNSI LEIRTVGGLF VGIQLDHNVS DLVSYAKSQK ILIINAGDDV 

       430        440        450 
IRFCPPLTIT KQEIDQLLLV LKNYLIKVNS NKK 

Q55DT8 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
 Hosted by ca flag CBR Canada Mirror sites: Australia  Brazil  China  Korea  Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!