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UniProtKB/Swiss-Prot entry Q48CM7

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name BETA_PSE14
Primary accession number Q48CM7
Secondary accession numbers None
Integrated into Swiss-Prot on October 31, 2006
Sequence was last modified on September 13, 2005 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 25)
Name and origin of the protein
Protein name Choline dehydrogenase
Synonyms CHD
CDH
EC 1.1.99.1
Gene name
Name: betA
OrderedLocusNames: PSPPH_4766
From
Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) [TaxID: 264730] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1128/JB.187.18.6488-6498.2005; PubMed=16159782 [NCBI, ExPASy, EBI, Israel, Japan]
Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn Giglio M., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Crabtree J., Creasy T., Davidsen T.M., Haft D.H., Zafar N., Zhou L., Halpin R., Holley T., Khouri H.M., Feldblyum T.V., White O., Fraser C.M., Chatterjee A.K., Cartinhour S., Schneider D., Mansfield J.W., Collmer A., Buell R.;
"Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition.";
J. Bacteriol. 187:6488-6498(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000058; AAZ35413.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_276866.1; -.
3D structure databases
ModBase Q48CM7.
Ontologies
GO
GO:0008812; Molecular function: choline dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0019285; Biological process: glycine betaine biosynthetic process from choline (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00750; -; 1.
PBIL [Tree]
InterPro IPR011533; Choline_dehydrogenase.
IPR012132; GMC_OxRdtase.
IPR000172; GMC_OxRdtase_N.
IPR007867; GMC_OxRtase_C.
Graphical view of domain structure.
Pfam PF05199; GMC_oxred_C; 1.
PF00732; GMC_oxred_N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000137; Alcohol_oxidase; 1.
TIGRFAMs TIGR01810; betA; 1.
PROSITE PS00623; GMC_OXRED_1; 1.
PS00624; GMC_OXRED_2; 1.
BLOCKS Q48CM7.
Genome annotation databases
GeneID 3557996; -.
GenomeReviews CP000058_GR; PSPPH_4766.
KEGG psp:PSPPH_4766; -.
NMPDR fig|264730.3.peg.4707; -.
Phylogenomic databases
HOGENOM Q48CM7; -.
Genome annotation databases
CMR Q48CM7; PSPPH_4766.
Other
ProtoNet Q48CM7.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   568  568     Choline dehydrogenase. PRO_0000258930
NP_BIND   8    37  30     FAD (Probable). 
ACT_SITE   477   477        By similarity. 
Sequence information
Length: 568 AA [This is the length of the unprocessed precursor] Molecular weight: 62732 Da [This is the MW of the unprocessed precursor] CRC64: EDA8D9020368A32B [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MTTQSEYDYI IIGAGSAGNT LAARLTEDAG VTVLLLEAGG PDYRLDFRTQ MPAALAFPLQ 

        70         80         90        100        110        120 
GRRYNWAYET EPEPHMNNRR MECGRGKGLG GSSLINGMCY IRGNAMDYDG WAKEPGLEDW 

       130        140        150        160        170        180 
SYLDCLPYFR KAETRDIGPN DYHGGEGPVS VTKPKAGNNP LFHAMVEAGV QAGFPRTDDL 

       190        200        210        220        230        240 
NGYQQEGFGP MDRTVTPNGR RASTARGYLD EAKKRSTLTI VTHALTDRIL FEGKRAVGVA 

       250        260        270        280        290        300 
YLVGDSDTRI QARARKEVLL CGGAIASPQI LQRSGVGPAE VLNKLDIPVV HDLPGVGQNL 

       310        320        330        340        350        360 
QDHLEMYLQY ACTQPVSLYP SLKWWNQPAI GAKWMFLGTG IGASNQFEAG GFIRSSEAFE 

       370        380        390        400        410        420 
WPNIQYHFLP VAINYNGTKG VQEHGFQAHV GSMRSPSRGR VQVKSKDPRE YPSILFNYMS 

       430        440        450        460        470        480 
SEQDWQEFRD GIRLTREIMQ QPALDPYRGR EISPGIDVQS DEALDQFVRE HAETAYHPSC 

       490        500        510        520        530        540 
SCKMGTDEMA VVDGQGRVHG LQSLRVVDAS IMPIITTGNL NAPTIMIAEK IADKIRGRQP 

       550        560 
LPRSTADYFV AGDKPARGKP LREISHQA
Q48CM7 in FASTA format

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