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UniProtKB/Swiss-Prot entry Q47140


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name HCAF_ECOLI
Primary accession number Q47140
Secondary accession number P77508
Integrated into Swiss-Prot on November 1, 1997
Sequence was last modified on November 1, 1997 (Sequence version 2)
Annotations were last modified on    September 2, 2008 (Entry version 61)
Name and origin of the protein
Protein name 3-phenylpropionate/cinnamic acid dioxygenase subunit beta
Synonyms EC 1.14.12.19
Digoxigenin subunit beta
Gene name
Name: hcaF
Synonyms: digB, hcaA2, hcaB, phdC2, yfhV
OrderedLocusNames: b2539, JW2523
From
Escherichia coli (strain K12) [TaxID: 83333] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
DOI=10.1093/dnares/4.2.91; PubMed=9205837 [NCBI, ExPASy, EBI, Israel, Japan]
Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T., Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K., Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T., Oyama S., Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H., Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.;
"Construction of a contiguous 874-kb sequence of the Escherichia coli-K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features.";
DNA Res. 4:91-113(1997).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
DOI=10.1126/science.277.5331.1453; PubMed=9278503 [NCBI, ExPASy, EBI, Israel, Japan]
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.;
"The complete genome sequence of Escherichia coli K-12.";
Science 277:1453-1474(1997).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
DOI=10.1038/msb4100049; PubMed=16738553 [NCBI, ExPASy, EBI, Israel, Japan]
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.";
Mol. Syst. Biol. 2:E1-E5(2006).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-49.
STRAIN=K12;
Turlin E., Gasser F., Biville F.;
Submitted (SEP-1994) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 42-172, AND FUNCTION IN CATABOLISM OF PHENYLPROPIONIC AND CINNAMIC ACIDS.
STRAIN=K12 / MC1061 / ATCC 53338 / DSM 7140;
PubMed=9603882 [NCBI, ExPASy, EBI, Israel, Japan]
Diaz E., Ferrandez A., Garcia J.L.;
"Characterization of the hca cluster encoding the dioxygenolytic pathway for initial catabolism of 3-phenylpropionic acid in Escherichia coli K-12.";
J. Bacteriol. 180:2915-2923(1998).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U00096; AAC75592.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP009048; BAA16442.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Z37966; CAA86019.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
Y11070; CAA71949.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR B65031; B65031.
RefSeq AP_003125.1; -.
NP_417034.1; -.
3D structure databases
ModBase Q47140.
Enzyme and pathway databases
BioCyc EcoCyc:HCAA2-MON; -.
MetaCyc:HCAA2-MON; -.
Organism-specific databases
EchoBASE EB3230; -.
EcoGene EG13457; hcaF.
Ontologies
GO
GO:0008695; Molecular function: 3-phenylpropionate dioxygenase activity (inferred from electronic annotation from HAMAP).
GO:0019439; Biological process: aromatic compound catabolic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_01649; -; 1.
PBIL [Tree]
InterPro IPR000391; Rng_hydr_dOase-B.
Graphical view of domain structure.
Pfam PF00866; Ring_hydroxyl_B; 1.
Pfam graphical view of domain structure.
BLOCKS Q47140.
Genome annotation databases
GeneID 946997; -.
GenomeReviews U00096_GR; b2539.
AP009048_GR; JW2523.
KEGG ecj:JW2523; -.
eco:b2539; -.
Phylogenomic databases
HOGENOM Q47140; -.
Genome annotation databases
CMR Q47140; b2539.
Other
ProtoNet Q47140.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Aromatic hydrocarbons catabolism; Complete proteome; Dioxygenase; NAD; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom  To Length Description FTId
CHAIN   1   172  172     3-phenylpropionate/cinnamic acid dioxygenase subunit beta. PRO_0000085077
CONFLICT   11    11        H -> Y (in Ref. 4; CAA86019). 
CONFLICT   49    49        N -> D (in Ref. 4; CAA86019). 
Sequence information
Length: 172 AA [This is the length of the unprocessed precursor] Molecular weight: 20579 Da [This is the MW of the unprocessed precursor] CRC64: 83833B22A75BE546 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSAQVSLELH HRISQFLFHE ASLLDDWKFR DWLAQLDEEI RYTMRTTVNA QTRDRRKGVQ 

        70         80         90        100        110        120 
PPTTWIFNDT KDQLERRIAR LETGMAWAEE PPSRTRHLIS NCQISETDIP NVFAVRVNYL 

       130        140        150        160        170 
LYRAQKERDE TFYVGTRFDK VRRLEDDNWR LLERDIVLDQ AVITSHNLSV LF 

Q47140 in FASTA format

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