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UniProtKB/Swiss-Prot entry Q42536


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PORA_ARATH
Primary accession number Q42536
Secondary accession number Q9FK22
Integrated into Swiss-Prot on December 1, 2000
Sequence was last modified on December 6, 2002 (Sequence version 2)
Annotations were last modified on    July 22, 2008 (Entry version 69)
Name and origin of the protein
Protein name Protochlorophyllide reductase A, chloroplastic [Precursor]
Synonyms PCR A
EC 1.3.1.33
NADPH-protochlorophyllide oxidoreductase A
POR A
Gene name
Name: PORA
OrderedLocusNames: At5g54190
ORFNames: K18G13.7
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=cv. Columbia;
DOI=10.1104/pp.108.4.1505; PubMed=7659751 [NCBI, ExPASy, EBI, Israel, Japan]
Armstrong G.A., Runge S., Frick G., Sperling U., Apel K.;
"Identification of NADPH:protochlorophyllide oxidoreductases A and B: a branched pathway for light-dependent chlorophyll biosynthesis in Arabidopsis thaliana.";
Plant Physiol. 108:1505-1517(1995).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1093/dnares/5.3.203; PubMed=9734815 [NCBI, ExPASy, EBI, Israel, Japan]
Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N., Tabata S.;
"Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence features of the regions of 1,367,185 bp covered by 19 physically assigned P1 and TAC clones.";
DNA Res. 5:203-216(1998).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
DOI=10.1126/science.1088305; PubMed=14593172 [NCBI, ExPASy, EBI, Israel, Japan]
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis genome.";
Science 302:842-846(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U29699; AAC49043.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB013387; BAB11581.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BT003853; AAO41903.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BT005080; AAO50613.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_200230.1; -.
UniGene At.23877
3D structure databases
HSSP P14061; 1FDU. [HSSP ENTRY / PDB]
ModBase Q42536.
Organism-specific databases
TAIR At5g54190; -.
Gene expression databases
ArrayExpress Q42536; -.
Family and domain databases
InterPro IPR002198; DHase_sc/Rdtase_SDR.
IPR002347; Glc/ribitol_DHase.
IPR016040; NAD(P)-bd.
IPR005979; Prochl_reduct.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 1.
PANTHER PTHR19410; ADH_short_C2; 1.
Pfam PF00106; adh_short; 1.
Pfam graphical view of domain structure.
PRINTS PR00081; GDHRDH.
TIGRFAMs TIGR01289; LPOR; 1.
BLOCKS Q42536.
Genome annotation databases
GeneID 835507; -.
GenomeReviews BA000015_GR; AT5G54190.
NMPDR fig|3702.1.peg.27326; -.
Other
ProtoNet Q42536.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Alternative splicing; Chlorophyll biosynthesis; Chloroplast; Complete proteome; NADP; Oxidoreductase; Photosynthesis; Plastid; Transit peptide.
Features
SEVIEWER logo Feature table viewer
KeyFrom  To Length Description FTId
TRANSIT   1    69  69     Chloroplast (Potential). 
CHAIN   70   405  336     Protochlorophyllide reductase A, chloroplastic. PRO_0000023287
CONFLICT   37    37        V -> I (in Ref. 1; AAC49043). 
Sequence information
Length: 405 AA [This is the length of the unprocessed precursor] Molecular weight: 43863 Da [This is the MW of the unprocessed precursor] CRC64: EB82F2CEF0480D2E [This is a checksum on the sequence]
        10         20         30         40         50         60 
MALQAASLVS SAFSVRKDGK LNASASSSFK ESSLFGVSLS EQSKADFVSS SLRCKREQSL 

        70         80         90        100        110        120 
RNNKAIIRAQ AIATSTPSVT KSSLDRKKTL RKGNVVVTGA SSGLGLATAK ALAETGKWHV 

       130        140        150        160        170        180 
IMACRDFLKA ERAAQSAGMP KDSYTVMHLD LASLDSVRQF VDNFRRAEMP LDVLVCNAAV 

       190        200        210        220        230        240 
YQPTANQPTF TAEGFELSVG INHLGHFLLS RLLIDDLKNS DYPSKRLIIV GSITGNTNTL 

       250        260        270        280        290        300 
AGNVPPKANL GDLRGLAGGL NGLNSSAMID GGDFVGAKAY KDSKVCNMLT MQEFHRRFHE 

       310        320        330        340        350        360 
DTGITFASLY PGCIATTGLF REHIPLFRTL FPPFQKYITK GYVSESEAGK RLAQVVADPS 

       370        380        390        400 
LTKSGVYWSW NKTSASFENQ LSQEASDVEK ARRVWEVSEK LVGLA 

Q42536 in FASTA format

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