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UniProtKB/Swiss-Prot entry Q3MID2


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name CP4F3_RAT
Primary accession number Q3MID2
Secondary accession numbers None
Integrated into Swiss-Prot on May 30, 2006
Sequence was last modified on October 25, 2005 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 25)
Name and origin of the protein
Protein name Cytochrome P450 4F3
Synonyms EC 1.14.13.30
CYPIVF3
Leukotriene-B(4) omega-hydroxylase
Leukotriene-B(4) 20-monooxygenase
Cytochrome P450-LTB-omega
Gene name
Name: Cyp4f3
Synonyms: Cyp4f18
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Prostate;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BC101918; AAI01919.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001028858.1; -.
UniGene Rn.215683
3D structure databases
ModBase Q3MID2.
Organism-specific databases
RGD 1305261; Cyp4f18.
Ontologies
GO
GO:0005789; Cellular component: endoplasmic reticulum membrane (inferred from electronic annotation from UniProtKB-SubCell).
QuickGo view.
Family and domain databases
InterPro IPR001128; Cyt_P450.
IPR002401; Cyt_P450_E_grp-I.
Graphical view of domain structure.
Gene3D G3DSA:1.10.630.10; Cyt_P450; 1.
PANTHER PTHR19383; Cyt_P450; 1.
Pfam PF00067; p450; 1.
Pfam graphical view of domain structure.
PRINTS PR00463; EP450I.
PR00385; P450.
PROSITE PS00086; CYTOCHROME_P450; 1.
BLOCKS Q3MID2.
Genome annotation databases
Ensembl ENSRNOG00000015751; Rattus norvegicus. [Contig view]
GeneID 290623; -.
KEGG rno:290623; -.
Phylogenomic databases
HOVERGEN Q3MID2; -.
Other
ProtoNet Q3MID2.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Endoplasmic reticulum; Heme; Iron; Membrane; Metal-binding; Microsome; Monooxygenase; NADP; Oxidoreductase; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   524  524     Cytochrome P450 4F3. PRO_0000238925
TRANSMEM   15    35  21     Potential. 
METAL   468   468        Iron (heme axial ligand) (By similarity). 
Sequence information
Length: 524 AA [This is the length of the unprocessed precursor] Molecular weight: 59906 Da [This is the MW of the unprocessed precursor] CRC64: 8DC9033E01F1A1E8 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MPLLSLSWLG LGHTAASPWL LLLLVGASCL LAYILPQVYA VFENSRRLRR FPQPPPRNWL 

        70         80         90        100        110        120 
FGHLGLIQSS EEGLLYIQSL SRTFRDVCCW WVGPWHPVIR IFHPAFIKPV ILAPASVAPK 

       130        140        150        160        170        180 
DRVFYRFLRP WLGDGLLLST GDKWSRHRRM LTPAFHFNIL KPYVKIFNDS TNIMHAKWQR 

       190        200        210        220        230        240 
LASQGSARLD MFEHISLMTL DSLQKCVFSF DSNCQEKPSE YITAILELSA LVARRHQSLL 

       250        260        270        280        290        300 
LHVDLFYHLT RDGMRFRKAC RLVHDFTDAV IRERRCTLPD QGGDDALKAK AKAKTLDFID 

       310        320        330        340        350        360 
VLLLSKDEHG EALSDEDIRA EADTFMFGGH DTTASGLSWI LYNLAKHPEY QERCRQEVRE 

       370        380        390        400        410        420 
LLRDREPEEI EWDDLAQLPF LTMCIKESLR LHPPATAISR CCTQDIMLPD GRVIPKGVIC 

       430        440        450        460        470        480 
RISIFGTHHN PAVWPDPEVY NPFRFDADNG KGRSPLAFIP FSAGPRNCIG QTFAMSEMKV 

       490        500        510        520 
ALALTLLRFR VLPDDKEPRR KPELILRAEG GLWLRVEPLS AGAH 

Q3MID2 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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NPSA logo NPSA Sequence analysis tools

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