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UniProtKB/Swiss-Prot entry Q2RBK2


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LAC17_ORYSJ
Primary accession number Q2RBK2
Secondary accession numbers None
Integrated into Swiss-Prot on June 26, 2007
Sequence was last modified on January 24, 2006 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 30)
Name and origin of the protein
Protein name Putative laccase-17 [Precursor]
Synonyms EC 1.10.3.2
Benzenediol:oxygen oxidoreductase 17
Urishiol oxidase 17
Diphenol oxidase 17
Gene name
Name: LAC17
OrderedLocusNames: Os11g0108700, LOC_Os11g01730
ORFNames: OsJ_031367
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1186/1741-7007-3-20; PubMed=16188032 [NCBI, ExPASy, EBI, Israel, Japan]
The rice chromosomes 11 and 12 sequencing consortia;
"The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications.";
BMC Biol. 3:20-20(2005).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature03895; PubMed=16100779 [NCBI, ExPASy, EBI, Israel, Japan]
International rice genome sequencing project (IRGSP);
"The map-based sequence of the rice genome.";
Nature 436:793-800(2005).
[3]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
DOI=10.1101/gr.5509507; PubMed=17210932 [NCBI, ExPASy, EBI, Israel, Japan]
The rice annotation project (RAP);
"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.";
Genome Res. 17:175-183(2007).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1371/journal.pbio.0030038; PubMed=15685292 [NCBI, ExPASy, EBI, Israel, Japan]
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
"The genomes of Oryza sativa: a history of duplications.";
PLoS Biol. 3:266-281(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
DP000010; ABA91124.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP008217; BAF27393.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CM000148; EAZ17158.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001065548.1; -.
UniGene Os.56166
3D structure databases
ModBase Q2RBK2.
Organism-specific databases
Gramene Q2RBK2; -.
Family and domain databases
InterPro IPR001117; Cu-oxidase.
IPR011706; Cu-oxidase_2.
IPR011707; Cu-oxidase_3.
IPR002355; Cu_oxidase_Cu_BS.
IPR008972; Cupredoxin.
IPR017761; Laccase.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.420; Cupredoxin; 3.
Pfam PF00394; Cu-oxidase; 1.
PF07731; Cu-oxidase_2; 1.
PF07732; Cu-oxidase_3; 1.
Pfam graphical view of domain structure.
PROSITE PS00079; MULTICOPPER_OXIDASE1; 1.
PS00080; MULTICOPPER_OXIDASE2; 1.
BLOCKS Q2RBK2.
Genome annotation databases
GeneID 4349566; -.
KEGG osa:4349566; -.
Other
ProtoNet Q2RBK2.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Apoplast; Copper; Glycoprotein; Lignin degradation; Metal-binding; Oxidoreductase; Repeat; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    22  22     Potential. 
CHAIN   23   567  545     Putative laccase-17. PRO_0000291901
DOMAIN   30   146  117     Plastocyanin-like 1. 
DOMAIN   158   310  153     Plastocyanin-like 2. 
DOMAIN   415   551  137     Plastocyanin-like 3. 
METAL   80    80        Copper 1 (By similarity). 
METAL   82    82        Copper 2 (By similarity). 
METAL   125   125        Copper 2 (By similarity). 
METAL   127   127        Copper 3 (By similarity). 
METAL   468   468        Copper 4 (By similarity). 
METAL   471   471        Copper 1 (By similarity). 
METAL   473   473        Copper 3 (By similarity). 
METAL   530   530        Copper 3 (By similarity). 
METAL   531   531        Copper 4 (By similarity). 
METAL   532   532        Copper 2 (By similarity). 
METAL   536   536        Copper 4 (By similarity). 
CARBOHYD   76    76        N-linked (GlcNAc...) (Potential). 
CARBOHYD   187   187        N-linked (GlcNAc...) (Potential). 
CARBOHYD   241   241        N-linked (GlcNAc...) (Potential). 
CARBOHYD   298   298        N-linked (GlcNAc...) (Potential). 
CARBOHYD   312   312        N-linked (GlcNAc...) (Potential). 
CARBOHYD   327   327        N-linked (GlcNAc...) (Potential). 
CARBOHYD   365   365        N-linked (GlcNAc...) (Potential). 
CARBOHYD   368   368        N-linked (GlcNAc...) (Potential). 
CARBOHYD   378   378        N-linked (GlcNAc...) (Potential). 
CARBOHYD   388   388        N-linked (GlcNAc...) (Potential). 
CARBOHYD   430   430        N-linked (GlcNAc...) (Potential). 
Sequence information
Length: 567 AA [This is the length of the unprocessed precursor] Molecular weight: 61544 Da [This is the MW of the unprocessed precursor] CRC64: AD2816C44ED952B5 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MPSRGCSCWL LSLALLCSLA AAKEQYHEFV IRETTVKRLC KSHNIMTVNG QFPGPTLEIN 

        70         80         90        100        110        120 
EGDSLIINLI NRGRYNMTLH WHGVRQMRTG WSDGPEYVTQ CPVRPGQSYR YRFTVAAQEG 

       130        140        150        160        170        180 
TLWWHAHSSW LRATVYGALL IRPRDGTSYP FDVQPTRELA PILLGEWWDM NPVDVVRAAT 

       190        200        210        220        230        240 
RTGAAPNISD ALTVNAQPGD LYSCSSHDTA VFPVTSGETN LLRFINAALN TELFVSLAGH 

       250        260        270        280        290        300 
NMTVVAADAS YTKPYTTSLL LLAPGQTTDV LVTFDQPPGR YYLAARAYAS AQGVPFDNTT 

       310        320        330        340        350        360 
TTAIFDYGAA NNASSAAIAM PTLPAYNDTT AATAFTTNLR GLRKAELPSR VDESLFFTVG 

       370        380        390        400        410        420 
VGLFNCTNAT AQQCGGPNGT RFAASINNVS FVLPSSTSIL QAHHHGAPGG VFTADFPANP 

       430        440        450        460        470        480 
PVQFDYTAQN VSRALWQPVA GTKVYKLKYG SAVQVVLQGT NIFAGENHPI HLHGYDFYIL 

       490        500        510        520        530        540 
AEGLGNFDAG ADTGKFNVED PPMRNTVGVP VNGWAVIRFV ADNPGVWLMH CHLDVHITWG 

       550        560 
LAMAFLVDDG VGELQSLEAP PPDLPLC 

Q2RBK2 in FASTA format

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