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UniProtKB/Swiss-Prot entry Q2R0L0


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LAC20_ORYSJ
Primary accession number Q2R0L0
Secondary accession numbers None
Integrated into Swiss-Prot on June 26, 2007
Sequence was last modified on January 24, 2006 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 31)
Name and origin of the protein
Protein name Laccase-20 [Precursor]
Synonyms EC 1.10.3.2
Benzenediol:oxygen oxidoreductase 20
Urishiol oxidase 20
Diphenol oxidase 20
Gene name
Name: LAC20
OrderedLocusNames: Os11g0641800, LOC_Os11g42220
ORFNames: OsJ_033255
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1186/1741-7007-3-20; PubMed=16188032 [NCBI, ExPASy, EBI, Israel, Japan]
The rice chromosomes 11 and 12 sequencing consortia;
"The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications.";
BMC Biol. 3:20-20(2005).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature03895; PubMed=16100779 [NCBI, ExPASy, EBI, Israel, Japan]
International rice genome sequencing project (IRGSP);
"The map-based sequence of the rice genome.";
Nature 436:793-800(2005).
[3]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
DOI=10.1101/gr.5509507; PubMed=17210932 [NCBI, ExPASy, EBI, Israel, Japan]
The rice annotation project (RAP);
"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.";
Genome Res. 17:175-183(2007).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1371/journal.pbio.0030038; PubMed=15685292 [NCBI, ExPASy, EBI, Israel, Japan]
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
"The genomes of Oryza sativa: a history of duplications.";
PLoS Biol. 3:266-281(2005).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Nipponbare;
DOI=10.1126/science.1081288; PubMed=12869764 [NCBI, ExPASy, EBI, Israel, Japan]
The rice full-length cDNA consortium;
"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.";
Science 301:376-379(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
DP000010; ABA95019.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP008217; BAF28717.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CM000148; EAZ19046.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK066963; -; NOT_ANNOTATED_CDS; mRNA.[EMBL / GenBank / DDBJ]
RefSeq NP_001068354.1; -.
UniGene Os.8440
3D structure databases
ModBase Q2R0L0.
Organism-specific databases
Gramene Q2R0L0; -.
Family and domain databases
InterPro IPR001117; Cu-oxidase.
IPR011706; Cu-oxidase_2.
IPR011707; Cu-oxidase_3.
IPR002355; Cu_oxidase_Cu_BS.
IPR008972; Cupredoxin.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.420; Cupredoxin; 3.
Pfam PF00394; Cu-oxidase; 1.
PF07731; Cu-oxidase_2; 1.
PF07732; Cu-oxidase_3; 1.
Pfam graphical view of domain structure.
PROSITE PS00079; MULTICOPPER_OXIDASE1; 1.
PS00080; MULTICOPPER_OXIDASE2; 1.
BLOCKS Q2R0L0.
Genome annotation databases
GeneID 4351006; -.
KEGG osa:4351006; -.
Other
ProtoNet Q2R0L0.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Apoplast; Copper; Glycoprotein; Lignin degradation; Metal-binding; Oxidoreductase; Repeat; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    23  23     Potential. 
CHAIN   24   580  557     Laccase-20. PRO_0000291907
DOMAIN   31   147  117     Plastocyanin-like 1. 
DOMAIN   156   310  155     Plastocyanin-like 2. 
DOMAIN   419   561  143     Plastocyanin-like 3. 
METAL   81    81        Copper 1 (By similarity). 
METAL   83    83        Copper 2 (By similarity). 
METAL   126   126        Copper 2 (By similarity). 
METAL   128   128        Copper 3 (By similarity). 
METAL   478   478        Copper 4 (Potential). 
METAL   481   481        Copper 1 (By similarity). 
METAL   483   483        Copper 3 (By similarity). 
METAL   540   540        Copper 3 (By similarity). 
METAL   541   541        Copper 4 (Potential). 
METAL   542   542        Copper 2 (By similarity). 
METAL   546   546        Copper 4 (Potential). 
METAL   551   551        Copper 4 (Potential). 
CARBOHYD   36    36        N-linked (GlcNAc...) (Potential). 
CARBOHYD   42    42        N-linked (GlcNAc...) (Potential). 
CARBOHYD   115   115        N-linked (GlcNAc...) (Potential). 
CARBOHYD   200   200        N-linked (GlcNAc...) (Potential). 
CARBOHYD   339   339        N-linked (GlcNAc...) (Potential). 
CARBOHYD   373   373        N-linked (GlcNAc...) (Potential). 
CARBOHYD   392   392        N-linked (GlcNAc...) (Potential). 
CARBOHYD   399   399        N-linked (GlcNAc...) (Potential). 
CARBOHYD   429   429        N-linked (GlcNAc...) (Potential). 
CARBOHYD   460   460        N-linked (GlcNAc...) (Potential). 
Sequence information
Length: 580 AA [This is the length of the unprocessed precursor] Molecular weight: 64761 Da [This is the MW of the unprocessed precursor] CRC64: A32648EE21FCA3E0 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MVASLLCTVA VAVLAVAAVG GEAGVVEHTF VVHEMNVTHL CNTTKIFVVN GQLPGPTVDV 

        70         80         90        100        110        120 
TEGDTVVIHV VNKIPHGLTI HWHGVRQLRS CWADGAGFIT ECPIPPGSER TYRFNVTDQV 

       130        140        150        160        170        180 
GTLWWHAHVT CLRSTINGAF IIRPRDGKYP FPTPVKDVPI IIGEWWELDL VELDRRMRDG 

       190        200        210        220        230        240 
NFDDNPLSAT INGKLGDLSN CSGIVEESFV LNVKHGESYL LRVINTAFFS EYYFKVAGHT 

       250        260        270        280        290        300 
FTVVGADGNY LTPFKTDMVT VAPGEAIDVL MVADAPPAHY HMIALANQPP EPDPQIPKYI 

       310        320        330        340        350        360 
SRGLVRYTGV DANNNGLPVP MPIMPNQHNT MPSYYFHANL TGLMHPKHRR VPMHVDERIF 

       370        380        390        400        410        420 
IILGLGTICR GRNTTCKRQR SLETIEVATM NNVSFTHPNT TALLERYYDG TPEGVYTEDF 

       430        440        450        460        470        480 
PVRPPRPYNY TNPALIPPGP LEEVLEPTFK ATKLKRFKYN TSVEIIFQSS TLLMSDSNPM 

       490        500        510        520        530        540 
HLHGYDVFLL AQGLGSFNAK RDIRKFNYHN PQLRNTILVP RGGWAAVRFI TDNPGMWYLH 

       550        560        570        580 
CHFEFHIIMG MATAFIVEDG PTPETSLPPP PPEFKRCDAS 

Q2R0L0 in FASTA format

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