ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q20065


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name P4HA2_CAEEL
Primary accession number Q20065
Secondary accession numbers None
Integrated into Swiss-Prot on June 20, 2003
Sequence was last modified on November 1, 1996 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 57)
Name and origin of the protein
Protein name Prolyl 4-hydroxylase subunit alpha-2 [Precursor]
Synonyms EC 1.14.11.2
4-PH alpha-2
Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-2
Gene name
Name: phy-2
ORFNames: F35G2.4
From
Caenorhabditis elegans [TaxID: 6239] 
Taxonomy Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Bristol N2;
DOI=10.1126/science.282.5396.2012; PubMed=9851916 [NCBI, ExPASy, EBI, Israel, Japan]
The C. elegans sequencing consortium;
"Genome sequence of the nematode C. elegans: a platform for investigating biology.";
Science 282:2012-2018(1998).
[2]
FUNCTION.
DOI=10.1128/MCB.20.11.4084-4093.2000; PubMed=10805750 [NCBI, ExPASy, EBI, Israel, Japan]
Winter A.D., Page A.P.;
"Prolyl 4-hydroxylase is an essential procollagen-modifying enzyme required for exoskeleton formation and the maintenance of body shape in the nematode Caenorhabditis elegans.";
Mol. Cell. Biol. 20:4084-4093(2000).
[3]
FUNCTION.
DOI=10.1073/pnas.97.9.4736; PubMed=10781079 [NCBI, ExPASy, EBI, Israel, Japan]
Friedman L., Higgin J.J., Moulder G., Barstead R., Raines R.T., Kimble J.;
"Prolyl 4-hydroxylase is required for viability and morphogenesis in Caenorhabditis elegans.";
Proc. Natl. Acad. Sci. U.S.A. 97:4736-4741(2000).
[4]
SUBUNIT.
DOI=10.1074/jbc.M203824200; PubMed=12036960 [NCBI, ExPASy, EBI, Israel, Japan]
Myllyharju J., Kukkola L., Winter A.D., Page A.P.;
"The exoskeleton collagens in Caenorhabditis elegans are modified by prolyl 4-hydroxylases with unique combinations of subunits.";
J. Biol. Chem. 277:29187-29196(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
Z69637; CAA93469.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR T21816; T21816.
RefSeq NP_502317.1; -.
UniGene Cel.12536
3D structure databases
ModBase Q20065.
Organism-specific databases
WormBase WBGene00004025; phy-2.
WormPep F35G2.4; CE05811. [WormPep / WorfDB]
Gene expression databases
ArrayExpress Q20065; -.
Ontologies
GO
GO:0005788; Cellular component: endoplasmic reticulum lumen (inferred from electronic annotation from UniProtKB-SubCell).
GO:0004656; Molecular function: procollagen-proline 4-dioxygenase activity (inferred from electronic annotation from EC).
QuickGo view.
Family and domain databases
InterPro IPR005123; 2OG-FeII_Oase.
IPR006620; Pro_4_hyd_alph.
IPR013547; Pro_4_hyd_alph_N.
IPR011990; TPR-like_helical.
IPR013105; TPR_2.
Graphical view of domain structure.
Gene3D G3DSA:1.25.40.10; TPR-like_helical; 1.
Pfam PF03171; 2OG-FeII_Oxy; 1.
PF08336; P4Ha_N; 1.
PF07719; TPR_2; 1.
Pfam graphical view of domain structure.
SMART SM00702; P4Hc; 1.
SMART graphical view of domain structure.
BLOCKS Q20065.
Genome annotation databases
Ensembl F35G2.4; Caenorhabditis elegans. [Contig view]
GeneID 178170; -.
KEGG cel:F35G2.4; -.
Other
ProtoNet Q20065.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Dioxygenase; Endoplasmic reticulum; Glycoprotein; Iron; Metal-binding; Oxidoreductase; Signal; Vitamin C.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    16  16     Potential. 
CHAIN   17   539  523     Prolyl 4-hydroxylase subunit alpha-2. PRO_0000022729
DOMAIN   325   508  184     PKHD. 
ACT_SITE   500   500        Potential. 
METAL   419   419        Iron (By similarity). 
METAL   421   421        Iron (By similarity). 
METAL   490   490        Iron (By similarity). 
CARBOHYD   110   110        N-linked (GlcNAc...) (Potential). 
Sequence information
Length: 539 AA [This is the length of the unprocessed precursor] Molecular weight: 61527 Da [This is the MW of the unprocessed precursor] CRC64: 718F76F84193B02B [This is a checksum on the sequence]
        10         20         30         40         50         60 
MRAVLLVCLL AGLAHADLFT AIADLQHMLG AEKDVTTIID QYIEAERARL DDLRRYAHEY 

        70         80         90        100        110        120 
VHRNAHAESV GPEFVTNPIN AYLLIKRLTT EWKKVENIML NNKASTFLKN ITDNRVRSEV 

       130        140        150        160        170        180 
KFPGEEDLSG AATALLRLQD TYSLDTLDLS NGIIGGEKVS NKLSGHDTFE VGRSAYNQKD 

       190        200        210        220        230        240 
YYHCLMWMQV ALVKIENENP PTIEEWEILE YLAYSLYQQG NVRRALSLTK RLAKIAPNHP 

       250        260        270        280        290        300 
RAKGNVKWYE DMLQGKDMVG DLPPIVNKRV EYDGIVERDA YEALCRGEIP PVEPKWKNKL 

       310        320        330        340        350        360 
RCYLKRDKPF LKLAPIKVEI LRFDPLAVLF KNVIHDSEIE VIKELASPKL KRATVQNSKT 

       370        380        390        400        410        420 
GELEHATYRI SKSAWLKGDL DPVIDRVNRR IEDFTNLNQA TSEELQVANY GLGGHYDPHF 

       430        440        450        460        470        480 
DFARKEEKNA FKTLNTGNRI ATVLFYMSQP ERGGATVFNH LGTAVFPSKN DALFWYNLRR 

       490        500        510        520        530 
DGEGDLRTRH AACPVLLGVK WVSNKWIHEK GQEFTRPCGL EEEVQENFIG DLSPYANDP 

Q20065 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
 Hosted by kr flag YPRC Korea Mirror sites: Australia  Brazil  Canada  China  Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!