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UniProtKB/Swiss-Prot entry Q19AZ8


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name THRB_PIG
Primary accession number Q19AZ8
Secondary accession numbers None
Integrated into Swiss-Prot on May 1, 2007
Sequence was last modified on July 11, 2006 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 18)
Name and origin of the protein
Protein name Prothrombin [Precursor]
Synonyms EC 3.4.21.5
Coagulation factor II
Contains Activation peptide fragment 1
Activation peptide fragment 2
Thrombin light chain
Thrombin heavy chain
Gene name
Name: F2
From
Sus scrofa (Pig) [TaxID: 9823] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Liver;
Chen Y., Tan W., Cheng J.;
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
Comments
  • FUNCTION: Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing (By similarity).
  • CATALYTIC ACTIVITY: Selective cleavage of Arg-|-Gly bonds in fibrinogen to form fibrin and release fibrinopeptides A and B.
  • PTM: The gamma-carboxyglutamyl residues, which bind calcium ions, result from the carboxylation of glutamyl residues by a microsomal enzyme, the vitamin K-dependent carboxylase. The modified residues are necessary for the calcium-dependent interaction with a negatively charged phospholipid surface, which is essential for the conversion of prothrombin to thrombin (By similarity).
  • MISCELLANEOUS: Prothrombin is activated on the surface of a phospholipid membrane that binds the amino end of prothrombin and factors Va and Xa in Ca-dependent interactions; factor Xa removes the activation peptide and cleaves the remaining part into light and heavy chains. The activation process starts slowly because factor V itself has to be activated by the initial, small amounts of thrombin (By similarity).
  • MISCELLANEOUS: Thrombin can itself cleave the N-terminal fragment (fragment 1) of the prothrombin, prior to its activation by factor Xa (By similarity).
  • SIMILARITY: Belongs to the peptidase S1 family [view classification].
  • SIMILARITY: Contains 1 Gla (gamma-carboxy-glutamate) domain.
  • SIMILARITY: Contains 2 kringle domains.
  • SIMILARITY: Contains 1 peptidase S1 domain [view classification].
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
DQ530370; ABF82359.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001116457.1; -.
3D structure databases
SMR Q19AZ8; 208-364.
ModBase Q19AZ8.
Ontologies
GO
GO:0005576; Cellular component: extracellular region (inferred from electronic annotation from InterPro).
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from InterPro).
GO:0004252; Molecular function: serine-type endopeptidase activity (inferred from electronic annotation from InterPro).
GO:0006953; Biological process: acute-phase response (inferred from electronic annotation from UniProtKB-KW).
GO:0007596; Biological process: blood coagulation (inferred from electronic annotation from InterPro).
GO:0006508; Biological process: proteolysis (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR002383; Coagulation_factor_Gla.
IPR000001; Kringle.
IPR001254; Peptidase_S1_S6.
IPR001314; Peptidase_S1A.
IPR012051; Peptidase_S1A_pr.
IPR003966; Peptidase_S1A_prothrombin.
IPR000294; VitK_dep_GLA.
Graphical view of domain structure.
Gene3D G3DSA:2.40.20.10; Kringle; 2.
PANTHER PTHR19355:SF61; Peptidase_S1A_pr; 1.
Pfam PF00594; Gla; 1.
PF00051; Kringle; 2.
PF00089; Trypsin; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001149; Thrombin; 1.
PRINTS PR00722; CHYMOTRYPSIN.
PR00001; GLABLOOD.
PR00018; KRINGLE.
PR01505; PROTHROMBIN.
ProDom PD000395; Kringle; 2.
[Domain structure / List of seq. sharing at least 1 domain]
SMART SM00069; GLA; 1.
SM00130; KR; 2.
SM00020; Tryp_SPc; 1.
SMART graphical view of domain structure.
PROSITE PS00011; GLA_1; 1.
PS50998; GLA_2; 1.
PS00021; KRINGLE_1; 2.
PS50070; KRINGLE_2; 2.
PS50240; TRYPSIN_DOM; 1.
PS00134; TRYPSIN_HIS; 1.
PS00135; TRYPSIN_SER; 1.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
GeneID 100144442; -.
KEGG ssc:100144442; -.
Phylogenomic databases
HOVERGEN Q19AZ8; -.
Other
ProtoNet Q19AZ8.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Acute phase; Blood coagulation; Calcium; Cleavage on pair of basic residues; Gamma-carboxyglutamic acid; Glycoprotein; Hydrolase; Kringle; Protease; Repeat; Serine protease; Signal; Zymogen.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    24  24     Potential. 
PROPEP   25    43  19     By similarity. PRO_0000285892
CHAIN   44   623  580     Prothrombin. PRO_0000285893
PEPTIDE   44   199  156     Activation peptide fragment 1 (By similarity). PRO_0000285894
PEPTIDE   200   328  129     Activation peptide fragment 2 (By similarity). PRO_0000285918
CHAIN   329   364  36     Thrombin light chain (By similarity). PRO_0000285919
CHAIN   365   622  258     Thrombin heavy chain (By similarity). PRO_0000285920
DOMAIN   44    90  47     Gla. 
DOMAIN   108   187  80     Kringle 1. 
DOMAIN   213   292  80     Kringle 2. 
DOMAIN   365   619  255     Peptidase S1. 
REGION   552   574  23     High affinity receptor-binding region which is also known as the TP508 peptide (By similarity). 
ACT_SITE   407   407        Charge relay system (By similarity). 
ACT_SITE   463   463        Charge relay system (By similarity). 
ACT_SITE   569   569        Charge relay system (By similarity). 
SITE   199   200  2     Cleavage; by thrombin (By similarity). 
SITE   328   329  2     Cleavage; by factor Xa (By similarity). 
SITE   364   365  2     Cleavage; by factor Xa (By similarity). 
MOD_RES   50    50        4-carboxyglutamate (By similarity). 
MOD_RES   51    51        4-carboxyglutamate (By similarity). 
MOD_RES   58    58        4-carboxyglutamate (By similarity). 
MOD_RES   60    60        4-carboxyglutamate (By similarity). 
MOD_RES   63    63        4-carboxyglutamate (By similarity). 
MOD_RES   64    64        4-carboxyglutamate (By similarity). 
MOD_RES   69    69        4-carboxyglutamate (By similarity). 
MOD_RES   70    70        4-carboxyglutamate (By similarity). 
MOD_RES   73    73        4-carboxyglutamate (By similarity). 
MOD_RES   76    76        4-carboxyglutamate (By similarity). 
CARBOHYD   120   120        N-linked (GlcNAc...) (Potential). 
CARBOHYD   144   144        N-linked (GlcNAc...) (Potential). 
CARBOHYD   417   417        N-linked (GlcNAc...) (Potential). 
DISULFID   61    66        By similarity. 
DISULFID   91   104        By similarity. 
DISULFID   109   187        By similarity. 
DISULFID   130   170        By similarity. 
DISULFID   158   182        By similarity. 
DISULFID   214   292        By similarity. 
DISULFID   235   275        By similarity. 
DISULFID   263   287        By similarity. 
DISULFID   337   483        Interchain (between light and heavy chains) (By similarity). 
DISULFID   392   408        By similarity. 
DISULFID   537   551        By similarity. 
DISULFID   565   595        By similarity. 
Sequence information
Length: 623 AA [This is the length of the unprocessed precursor] Molecular weight: 70066 Da [This is the MW of the unprocessed precursor] CRC64: B7FEDC2231735D4E [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAHVGGLWLH GCLALAVLVS LVHSQHVFMA PQQALSLLQR ARRANSGFFE EMRKGNLERE 

        70         80         90        100        110        120 
CVEEQCSREE AYEALESPSE TDAFWAKYTA CESVRKSREK LVECLEGNCA EGLGMNYRGN 

       130        140        150        160        170        180 
ISVTRSGIEC QLWRSRYPHK PEVNSTMYPG ADLRENFCRN PDGSITGPWC YTTSPTVRRE 

       190        200        210        220        230        240 
ACSIPVCGQG RVTAELIPRS GGSTVNVSPP LETCVPERGR QYQGRLAVTS HGSPCLAWGS 

       250        260        270        280        290        300 
SQAKALSKDQ DFNPAVPLVE NFCRNPDGDQ EGAWCYVAGQ PGDFEYCDLD YCEEPVDEEV 

       310        320        330        340        350        360 
GDALGENADA AIEGRTTADD FQPFFNEKTF GAGEADCGLR PLFEKSSLED KTEKELFESY 

       370        380        390        400        410        420 
IEGRIVEGSD AEIGLAPWQV MIFRKSPQEL LCGASLISDR WVLTAAHCLL YPPWDKNFTE 

       430        440        450        460        470        480 
NDLLVRIGKH SRTRYERNIE KISMLEKIYI HPRYNWRENL DRDIALLKLR KPITFSDYIH 

       490        500        510        520        530        540 
PVCLPDKETA TKLLRAGYKG RVTGWGNLKE TWTTSASEVQ PSVLQVVNLP IVERLVCKAS 

       550        560        570        580        590        600 
TRIRITDNMF CAGYKPDEGK RGDACEGDSG GPFVMKSPFN NRWYQMGIVS WGEGCDRDGK 

       610        620 
YGFYTHVFRL KKWMQKVIDR FGG 

Q19AZ8 in FASTA format

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