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UniProtKB/Swiss-Prot entry Q13UP6

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name PDXH_BURXL
Primary accession number Q13UP6
Secondary accession numbers None
Integrated into Swiss-Prot on October 31, 2006
Sequence was last modified on August 22, 2006 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 17)
Name and origin of the protein
Protein name Pyridoxine/pyridoxamine 5'-phosphate oxidase
Synonyms EC 1.4.3.5
PNP/PMP oxidase
PNPOx
Pyridoxal 5'-phosphate synthase
Gene name
Name: pdxH
OrderedLocusNames: Bxeno_A3655
ORFNames: Bxe_A0741
From
Burkholderia xenovorans (strain LB400) [TaxID: 266265] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1073/pnas.0606924103; PubMed=17030797 [NCBI, ExPASy, EBI, Israel, Japan]
Chain P.S.G., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L., Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M., Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A., Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M., Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B., Tiedje J.M.;
"Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility.";
Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000270; ABE32193.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_560245.1; -.
3D structure databases
ModBase Q13UP6.
Ontologies
GO
GO:0010181; Molecular function: FMN binding (inferred from electronic annotation from HAMAP).
GO:0004733; Molecular function: pyridoxamine-phosphate oxidase activity (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0008615; Biological process: pyridoxine biosynthetic process (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
HAMAP MF_01629; -; 1.
PBIL [Tree]
InterPro IPR011576; PNPOx_rel_FMN_bd_core.
IPR000659; Pyridox_oxidase.
IPR012349; Split_barrel_FMN_bd.
Graphical view of domain structure.
Gene3D G3DSA:2.30.110.10; PNPOx_FMN_bd; 1.
PANTHER PTHR10851; Pyridox_oxidase; 1.
Pfam PF01243; Pyridox_oxidase; 1.
Pfam graphical view of domain structure.
ProDom PD006312; Pyridox_oxidase; 1.
[Domain structure / List of seq. sharing at least 1 domain]
TIGRFAMs TIGR00558; pdxH; 1.
PROSITE PS01064; PYRIDOX_OXIDASE; 1.
Genome annotation databases
GeneID 4005650; -.
GenomeReviews CP000270_GR; Bxeno_A3655.
KEGG bxe:Bxe_A0741; -.
Phylogenomic databases
HOGENOM Q13UP6; -.
Genome annotation databases
CMR Q13UP6; Bxeno_A3655.
Other
ProtoNet Q13UP6.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Flavoprotein; FMN; Oxidoreductase; Pyridoxine biosynthesis.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   213  213     Pyridoxine/pyridoxamine 5'-phosphate oxidase. PRO_0000255861
NP_BIND   76    77  2     FMN (By similarity). 
NP_BIND   140   141  2     FMN (By similarity). 
REGION   8    11  4     Substrate binding (By similarity). 
REGION   190   192  3     Substrate binding (By similarity). 
BINDING   61    61        FMN (By similarity). 
BINDING   64    64        FMN; via amide nitrogen (By similarity). 
BINDING   66    66        Substrate (By similarity). 
BINDING   83    83        FMN (By similarity). 
BINDING   123   123        Substrate (By similarity). 
BINDING   127   127        Substrate (By similarity). 
BINDING   131   131        Substrate (By similarity). 
Sequence information
Length: 213 AA [This is the length of the unprocessed precursor] Molecular weight: 24610 Da [This is the MW of the unprocessed precursor] CRC64: 3383F788B97DD9B9 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MTSLAELRKN YSLGSLDVGD VDRNPFRQFD TWFKQAVDAQ LPEPNTMTLA TVDPRGRPSA 

        70         80         90        100        110        120 
RIVLIKGVDE RGFVFFTNYE SRKGRELAAN PYASLLFYWI ELERQVRVEG RIVKTSAEES 

       130        140        150        160        170        180 
DGYFASRPLG SRIGAWASNQ SQVIESRSQL ETREREFSLL YGDQPPRPPH WGGYRLVPEA 

       190        200        210 
IEFWQGRPSR LHDRLLYTRS DEHSDWQISR LSP
Q13UP6 in FASTA format

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