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UniProtKB/Swiss-Prot entry Q13NG7


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name BETA_BURXL
Primary accession number Q13NG7
Secondary accession numbers None
Integrated into Swiss-Prot on October 31, 2006
Sequence was last modified on August 22, 2006 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 17)
Name and origin of the protein
Protein name Choline dehydrogenase
Synonyms CHD
CDH
EC 1.1.99.1
Gene name
Name: betA
OrderedLocusNames: Bxeno_B1404
ORFNames: Bxe_B1592
From
Burkholderia xenovorans (strain LB400) [TaxID: 266265] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1073/pnas.0606924103; PubMed=17030797 [NCBI, ExPASy, EBI, Israel, Japan]
Chain P.S.G., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L., Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M., Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A., Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M., Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B., Tiedje J.M.;
"Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility.";
Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000271; ABE34372.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_553722.1; -.
3D structure databases
ModBase Q13NG7.
Enzyme and pathway databases
BioCyc BXEN266265:BXE_B1592-MON; -.
Ontologies
GO
GO:0008812; Molecular function: choline dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0050660; Molecular function: FAD binding (inferred from electronic annotation from InterPro).
GO:0006066; Biological process: cellular alcohol metabolic process (inferred from electronic annotation from InterPro).
GO:0019285; Biological process: glycine betaine biosynthetic process from choline (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_00750; -; 1.
PBIL [Tree]
InterPro IPR011533; Choline_dehydrogenase.
IPR012132; GMC_OxRdtase.
IPR000172; GMC_OxRdtase_N.
IPR007867; GMC_OxRtase_C.
Graphical view of domain structure.
Pfam PF05199; GMC_oxred_C; 1.
PF00732; GMC_oxred_N; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000137; Alcohol_oxidase; 1.
TIGRFAMs TIGR01810; betA; 1.
PROSITE PS00623; GMC_OXRED_1; 1.
PS00624; GMC_OXRED_2; 1.
Genome annotation databases
GeneID 4007919; -.
GenomeReviews CP000271_GR; Bxeno_B1404.
KEGG bxe:Bxe_B1592; -.
Phylogenomic databases
HOGENOM Q13NG7; -.
Genome annotation databases
CMR Q13NG7; Bxeno_B1404.
Other
ProtoNet Q13NG7.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   561  561     Choline dehydrogenase. PRO_0000258923
NP_BIND   7    36  30     FAD (Probable). 
ACT_SITE   474   474        By similarity. 
Sequence information
Length: 561 AA [This is the length of the unprocessed precursor] Molecular weight: 62136 Da [This is the MW of the unprocessed precursor] CRC64: 1C0CDF3540761AD6 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAANEYDYII VGAGSAGNVL ASRLAEDADV TVLLLEAGGP DYRFDFRTQM PAALAYPLQG 

        70         80         90        100        110        120 
RRYNWAYETD PEPHMNNRRM ECGRGKGLGG SSLINGMCYI RGNALDYDGW AAHAGLENWT 

       130        140        150        160        170        180 
YLDCLPYFRK AETRDIGANA YHGGDGPVHV TTSKPGNNPL FAAMVEAGVQ AGFPRTDDLN 

       190        200        210        220        230        240 
GYQQEGFGPM DRTVTANGRR ASTARGYLDR AKARPNLTIV THAVTDRVLF SGKRAVGVSY 

       250        260        270        280        290        300 
LHHGNVLNAQ ARREVLVCSG AIASPQLLQR SGVGRSTWLR ELDVPLVHDL PGVGENLQDH 

       310        320        330        340        350        360 
LEMYIQYECK EPVSLYPALQ WWNQPAIGLE WMLNGTGIGA SNQFEAGGFI RTRDDDPWPN 

       370        380        390        400        410        420 
IQYHFLPVAI NYNGSNAIRM HGFQAHVGSM RSPSRGRVKL TSRDPNAHPG ILFNYMADPL 

       430        440        450        460        470        480 
DWREFRDGIR ITREIMRQPA LDRYRGRELN PGAELTTDEQ LDSFVRMRAE TAFHPSCSCK 

       490        500        510        520        530        540 
MGYDDMAVVD NEGRVHGMQG LRVVDASIMP RITTGNLNAP TIMLAEKIAD RIRGREALAR 

       550        560 
VDTPYFVANG VASRKRESAT V 

Q13NG7 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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