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UniProtKB/Swiss-Prot entry Q12P44

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name NAPA_SHEDO
Primary accession number Q12P44
Secondary accession numbers None
Integrated into Swiss-Prot on May 20, 2008
Sequence was last modified on August 22, 2006 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 28)
Name and origin of the protein
Protein name Periplasmic nitrate reductase [Precursor]
Synonym EC 1.7.99.4
Gene name
Name: napA
OrderedLocusNames: Sden_1497
From
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) [TaxID: 318161] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Richardson P.;
"Complete sequence of Shewanella denitrificans OS217.";
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000302; ABE54782.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_562505.1; -.
3D structure databases
SMR Q12P44; 39-828.
ModBase Q12P44.
Enzyme and pathway databases
BioCyc SDEN318161:SDEN_1497-MON; -.
Ontologies
GO
GO:0042597; Cellular component: periplasmic space (inferred from electronic annotation from UniProtKB-KW).
GO:0051539; Molecular function: 4 iron, 4 sulfur cluster binding (inferred from electronic annotation from InterPro).
GO:0009055; Molecular function: electron carrier activity (inferred from electronic annotation from HAMAP).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from HAMAP).
GO:0030151; Molecular function: molybdenum ion binding (inferred from electronic annotation from InterPro).
GO:0008940; Molecular function: nitrate reductase activity (inferred from electronic annotation from HAMAP).
GO:0022900; Biological process: electron transport chain (inferred from electronic annotation from UniProtKB-KW).
GO:0006777; Biological process: Mo-molybdopterin cofactor biosynthetic process (inferred from electronic annotation from HAMAP).
GO:0042128; Biological process: nitrate assimilation (inferred from electronic annotation from HAMAP).
GO:0006810; Biological process: transport (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_01630; -; 1.
PBIL [Tree]
InterPro IPR009010; Asp_de-COase-like_fold.
IPR006656; Mopterin_OxRdtase.
IPR006963; Mopterin_OxRdtase_Fe4S4.
IPR006655; Mopterin_OxRdtase_prok_CS.
IPR006657; MPT_dinuc_bd.
IPR010051; NO3_reductase_lsu_periplasm.
IPR006311; Tat.
Graphical view of domain structure.
Gene3D G3DSA:2.40.40.20; Asp_decarboxylase-like_fold; 1.
Pfam PF04879; Molybdop_Fe4S4; 1.
PF00384; Molybdopterin; 1.
PF01568; Molydop_binding; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR01706; NAPA; 1.
TIGR01409; TAT_signal_seq; 1.
PROSITE PS00551; MOLYBDOPTERIN_PROK_1; 1.
PS00490; MOLYBDOPTERIN_PROK_2; FALSE_NEG.
PS00932; MOLYBDOPTERIN_PROK_3; FALSE_NEG.
PS51318; TAT; 1.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
GeneID 4017266; -.
GenomeReviews CP000302_GR; Sden_1497.
KEGG sdn:Sden_1497; -.
NMPDR fig|318161.14.peg.1462; -.
Phylogenomic databases
HOGENOM Q12P44; -.
Genome annotation databases
CMR Q12P44; Sden_1497.
Other
ProtoNet Q12P44.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
4Fe-4S; Complete proteome; Electron transport; Iron; Iron-sulfur; Metal-binding; Molybdenum; Nitrate assimilation; Oxidoreductase; Periplasm; Signal; Transport.
Features
SEVIEWER logo Feature table viewer
KeyFrom  To Length Description FTId
SIGNAL   1    27  27     Tat-type signal (Potential). 
CHAIN   28   829  802     Periplasmic nitrate reductase. PRO_5000114527
METAL   46    46        Iron-sulfur (4Fe-4S) (By similarity). 
METAL   49    49        Iron-sulfur (4Fe-4S) (By similarity). 
METAL   53    53        Iron-sulfur (4Fe-4S) (By similarity). 
METAL   81    81        Iron-sulfur (4Fe-4S) (By similarity). 
Sequence information
Length: 829 AA [This is the length of the unprocessed precursor] Molecular weight: 93039 Da [This is the MW of the unprocessed precursor] CRC64: F452E7CAE302C02F [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MNRRDFMKAN AVIAAASAAG LALPAGASNL ITSSEQTKLE WNKAPCRFCG TGCSVMVATR 

        70         80         90        100        110        120 
EGKVVATHGD ANSEVNRGLS CIKGYFLSKI MYGRDRLTSP MLRMTDGKYD KHGEFTPVSW 

       130        140        150        160        170        180 
EKAFDTMAER WKATIKEKGP TAVGMFGSGQ WTVWEGYAAV KLMKAGFGTN NIDPNARHCM 

       190        200        210        220        230        240 
ASAVAGFMRT FGIDEPMGCY DDMEAADAFV LWGSNMAEMH PILWTRVTDR RLSAPHVKVA 

       250        260        270        280        290        300 
VLSTFEHRSF DLADLPMVFH PQTDLAILNF IANYIIQNNK VNWDFVNKHV NFRKGTTDIG 

       310        320        330        340        350        360 
YGLRPAHPTQ MKSKNAATAN DSTPIDFEQF KKFVADYDVE SVSKLSGVPE HKLLELAELY 

       370        380        390        400        410        420 
ADPKVKVTSF WTMGFNQHTR GVWCNNLMYN IHLLVGKIST PGNSPFSLTG QPSACGTARE 

       430        440        450        460        470        480 
VGTFSHRLPA DMVVTDPKHR KIAENIWKIP SGIIPEKPGY HAVEQSRRLK DGDLNCYWVQ 

       490        500        510        520        530        540 
VNNNMQAGPN INEEGLPGYR NPANFIVVSD AYPTVTTQAA DLILPTAMWV EKEGAYGNAE 

       550        560        570        580        590        600 
RRTQFWHQMV KAPGESKSDL WQLMEFSKRF TTDEVWSKAV LDANPKYKGK TLFEVLFKNG 

       610        620        630        640        650        660 
QVDKFPLADA DPKYMNDEND AFGFYVQKGL FEEYATFGRG HGHDLADFDT YHKEHGLRWP 

       670        680        690        700        710        720 
VVDGKETKWR FREGSDPYVK AGTGFEFYGK PDGRAVIFAL PYEPAAEAPD EEFDMWLSTG 

       730        740        750        760        770        780 
RVLEHWHSGS MTQRVPELYK AFPDAVCFMH PDDAKKRGLR RGDEVKVMSR RGEIKTRIET 

       790        800        810        820 
RGRNKPPVGL VFVPWFDASQ LINKVTLDAT DPISKQTDFK KCAVKVIKA
Q12P44 in FASTA format

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