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UniProtKB/Swiss-Prot entry Q0VS78


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name HEM1_ALCBS
Primary accession number Q0VS78
Secondary accession numbers None
Integrated into Swiss-Prot on January 15, 2008
Sequence was last modified on September 5, 2006 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 25)
Name and origin of the protein
Protein name Glutamyl-tRNA reductase
Synonyms GluTR
EC 1.2.1.70
Gene name
Name: hemA
OrderedLocusNames: ABO_0522
From
Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) [TaxID: 393595] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1038/nbt1232; PubMed=16878126 [NCBI, ExPASy, EBI, Israel, Japan]
Schneiker S., Martins dos Santos V.A.P., Bartels D., Bekel T., Brecht M., Buhrmester J., Chernikova T.N., Denaro R., Ferrer M., Gertler C., Goesmann A., Golyshina O.V., Kaminski F., Khachane A.N., Lang S., Linke B., McHardy A.C., Meyer F., Nechitaylo T., Puehler A., Regenhardt D., Rupp O., Sabirova J.S., Selbitschka W., Yakimov M.M., Timmis K.N., Vorhoelter F.-J., Weidner S., Kaiser O., Golyshin P.N.;
"Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis.";
Nat. Biotechnol. 24:997-1004(2006).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AM286690; CAL15970.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_692242.1; -.
3D structure databases
ModBase Q0VS78.
Enzyme and pathway databases
BioCyc ABOR393595:ABO_0522-MON; -.
Ontologies
GO
GO:0008883; Molecular function: glutamyl-tRNA reductase activity (inferred from electronic annotation from HAMAP).
GO:0006779; Biological process: porphyrin biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00087; -; 1.
PBIL [Tree]
InterPro IPR000343; 4pyrrol_synth_GluRdtase.
IPR015896; 4pyrrol_synth_GluRdtase_C.
IPR015895; 4pyrrol_synth_GluRdtase_N.
IPR016040; NAD(P)-bd.
IPR006151; Shikm_DHase/Glu-tRNA_Rdtase.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 1.
Pfam PF00745; GlutR_dimer; 1.
PF05201; GlutR_N; 1.
PF01488; Shikimate_DH; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000445; 4pyrrol_synth_GluRdtase; 1.
TIGRFAMs TIGR01035; hemA; 1.
PROSITE PS00747; GLUTR; 1.
BLOCKS Q0VS78.
Genome annotation databases
GeneID 4212665; -.
GenomeReviews AM286690_GR; ABO_0522.
KEGG abo:ABO_0522; -.
NMPDR fig|393595.12.peg.518; -.
Phylogenomic databases
HOGENOM Q0VS78; -.
Genome annotation databases
CMR Q0VS78; ABO_0522.
Other
ProtoNet Q0VS78.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; NADP; Oxidoreductase; Porphyrin biosynthesis.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   418  418     Glutamyl-tRNA reductase. PRO_1000004590
NP_BIND   186   191  6     NADP (By similarity). 
REGION   49    52  4     Substrate binding (By similarity). 
REGION   111   113  3     Substrate binding (By similarity). 
ACT_SITE   50    50        Nucleophile (By similarity). 
BINDING   106   106        Substrate (By similarity). 
BINDING   117   117        Substrate (By similarity). 
SITE   96    96  1     Important for activity (By similarity). 
Sequence information
Length: 418 AA [This is the length of the unprocessed precursor] Molecular weight: 46630 Da [This is the MW of the unprocessed precursor] CRC64: 09415E69BADCE528 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNLVAVGVNH TTADVELRER LAFSTQQAEV ALASLREMPG VREAALLSTC NRTELYCLTD 

        70         80         90        100        110        120 
DVTPNFAQWL ASSRNLSVER LSTVLYQHTG EQALEHMMRV AGGLDSLVLG EPQILGQMRE 

       130        140        150        160        170        180 
AYARAHEAGL LNGELSRLFQ EVFSVAKRIR TETGIGANPV SVAYAAVSFA RHIFADLKKS 

       190        200        210        220        230        240 
RALLIGAGEM IELVARHLSE QQVQEITIAN RTQERASELA AAVGGRGISL EELPVALERA 

       250        260        270        280        290        300 
DILISCTAAP LPIMGKGMVE RALKKRRHRP MFMVDIAVPR DIEPEVGELG DVYLYTVDHL 

       310        320        330        340        350        360 
QEAIQENVRS RQQAAQEASE LIRDAIVRHR RQRREQDAVK VLRDYREQRK AMAESELEKA 

       370        380        390        400        410 
LQQLRNGGDA EQVLRRFQHS LVNKWLHSPS VTLRKMAADG RAEALLLARE LLLDDDQS 

Q0VS78 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

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