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UniProtKB/Swiss-Prot entry Q0IQU1


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LAC22_ORYSJ
Primary accession number Q0IQU1
Secondary accession number Q53NW2
Integrated into Swiss-Prot on June 26, 2007
Sequence was last modified on June 26, 2007 (Sequence version 2)
Annotations were last modified on    September 2, 2008 (Entry version 18)
Name and origin of the protein
Protein name Laccase-22 [Precursor]
Synonyms EC 1.10.3.2
Benzenediol:oxygen oxidoreductase 22
Urishiol oxidase 22
Diphenol oxidase 22
Gene name
Name: LAC22
OrderedLocusNames: Os11g0708100, LOC_Os11g48060
ORFNames: OsJ_033548
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1186/1741-7007-3-20; PubMed=16188032 [NCBI, ExPASy, EBI, Israel, Japan]
The rice chromosomes 11 and 12 sequencing consortia;
"The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications.";
BMC Biol. 3:20-20(2005).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature03895; PubMed=16100779 [NCBI, ExPASy, EBI, Israel, Japan]
International rice genome sequencing project (IRGSP);
"The map-based sequence of the rice genome.";
Nature 436:793-800(2005).
[3]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
DOI=10.1101/gr.5509507; PubMed=17210932 [NCBI, ExPASy, EBI, Israel, Japan]
The rice annotation project (RAP);
"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.";
Genome Res. 17:175-183(2007).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1371/journal.pbio.0030038; PubMed=15685292 [NCBI, ExPASy, EBI, Israel, Japan]
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
"The genomes of Oryza sativa: a history of duplications.";
PLoS Biol. 3:266-281(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AC133008; AAX95423.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
DP000010; ABA95532.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP008217; BAF28924.1; ALT_SEQ; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CM000148; EAZ19339.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001068561.1; -.
UniGene Os.87771
3D structure databases
ModBase Q0IQU1.
Organism-specific databases
Gramene Q53NW2; -.
Family and domain databases
InterPro IPR001117; Cu-oxidase.
IPR011706; Cu-oxidase_2.
IPR011707; Cu-oxidase_3.
IPR002355; Cu_oxidase_Cu_BS.
IPR008972; Cupredoxin.
IPR017761; Laccase.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.420; Cupredoxin; 1.
Pfam PF00394; Cu-oxidase; 1.
PF07731; Cu-oxidase_2; 1.
PF07732; Cu-oxidase_3; 1.
Pfam graphical view of domain structure.
PROSITE PS00079; MULTICOPPER_OXIDASE1; 1.
PS00080; MULTICOPPER_OXIDASE2; 1.
BLOCKS Q0IQU1.
Genome annotation databases
GeneID 4351231; -.
KEGG osa:4351231; -.
Other
ProtoNet Q0IQU1.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Apoplast; Copper; Glycoprotein; Lignin degradation; Metal-binding; Oxidoreductase; Repeat; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    25  25     Potential. 
CHAIN   26   564  539     Laccase-22. PRO_0000291909
DOMAIN   36   152  117     Plastocyanin-like 1. 
DOMAIN   162   314  153     Plastocyanin-like 2. 
DOMAIN   414   548  135     Plastocyanin-like 3. 
METAL   86    86        Copper 1 (By similarity). 
METAL   88    88        Copper 2 (By similarity). 
METAL   131   131        Copper 2 (By similarity). 
METAL   133   133        Copper 3 (By similarity). 
METAL   465   465        Copper 4 (By similarity). 
METAL   468   468        Copper 1 (By similarity). 
METAL   470   470        Copper 3 (By similarity). 
METAL   527   527        Copper 3 (By similarity). 
METAL   528   528        Copper 4 (By similarity). 
METAL   529   529        Copper 2 (By similarity). 
METAL   533   533        Copper 4 (By similarity). 
CARBOHYD   41    41        N-linked (GlcNAc...) (Potential). 
CARBOHYD   82    82        N-linked (GlcNAc...) (Potential). 
CARBOHYD   118   118        N-linked (GlcNAc...) (Potential). 
CARBOHYD   191   191        N-linked (GlcNAc...) (Potential). 
CARBOHYD   302   302        N-linked (GlcNAc...) (Potential). 
CARBOHYD   331   331        N-linked (GlcNAc...) (Potential). 
CARBOHYD   379   379        N-linked (GlcNAc...) (Potential). 
CARBOHYD   389   389        N-linked (GlcNAc...) (Potential). 
CARBOHYD   424   424        N-linked (GlcNAc...) (Potential). 
CARBOHYD   437   437        N-linked (GlcNAc...) (Potential). 
CARBOHYD   447   447        N-linked (GlcNAc...) (Potential). 
Sequence information
Length: 564 AA [This is the length of the unprocessed precursor] Molecular weight: 62042 Da [This is the MW of the unprocessed precursor] CRC64: C88700E8EDA0C0D2 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAVLPESRRL SLLLMAACFL LQALSAHAIT RHYKFNVVMR NMTRLCSTKP ILTVNGKFPG 

        70         80         90        100        110        120 
PTLYAREGDN VLVKVVNHVA HNVTIHWHGV RQIRTGWYDG PAYITQCPIQ PGSSFLYNFT 

       130        140        150        160        170        180 
ITGQRGTLLW HAHINWLRAT VHGAIVILPK LGVPYPFPAP HKEAVIVLGE WWKEDTETVI 

       190        200        210        220        230        240 
NQAMQLGVGP NISDSHTING HPGPLSECAS SQDGFKLSVE NGKTYMLRII NAALNDDLFF 

       250        260        270        280        290        300 
KVAGHELTVV EVDAVYTKPF KTDTLLITPG QTTNVLVRAN QGAGRYLLSV SPFMDAPVQV 

       310        320        330        340        350        360 
DNKTGTATLH YANTVSSSMA SLTLVKPPPQ NATHIVSKFT DSLHSLNSKE YPANVPQTVD 

       370        380        390        400        410        420 
HSLLLTVGVG VNPCPSCING TRVVGTINNV TFIMPSTPIL QAHYYNIPGV FTEDFPATPL 

       430        440        450        460        470        480 
HKFNYTGSGP KNLQTMNGTR VYRLPYNASV QVVLQDTGII SPESHPIHLH GFNFFVVGKG 

       490        500        510        520        530        540 
VGNYNPRTSP STFNLIDPIE RNTIGVPTGG WTAIRFRSDN PGVWFMHCHF EVHTSWGLKM 

       550        560 
AFVVDNGKRP SETLIPPPKD LPQC 

Q0IQU1 in FASTA format

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