ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q0IP28


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name LAC25_ORYSJ
Primary accession number Q0IP28
Secondary accession number Q2QUK8
Integrated into Swiss-Prot on June 26, 2007
Sequence was last modified on October 3, 2006 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 18)
Name and origin of the protein
Protein name Laccase-25 [Precursor]
Synonyms EC 1.10.3.2
Benzenediol:oxygen oxidoreductase 25
Urishiol oxidase 25
Diphenol oxidase 25
Gene name
Name: LAC25
OrderedLocusNames: Os12g0259800, LOC_Os12g15920
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1186/1741-7007-3-20; PubMed=16188032 [NCBI, ExPASy, EBI, Israel, Japan]
The rice chromosomes 11 and 12 sequencing consortia;
"The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications.";
BMC Biol. 3:20-20(2005).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature03895; PubMed=16100779 [NCBI, ExPASy, EBI, Israel, Japan]
International rice genome sequencing project (IRGSP);
"The map-based sequence of the rice genome.";
Nature 436:793-800(2005).
[3]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
DOI=10.1101/gr.5509507; PubMed=17210932 [NCBI, ExPASy, EBI, Israel, Japan]
The rice annotation project (RAP);
"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.";
Genome Res. 17:175-183(2007).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
DP000011; ABA97328.1; ALT_SEQ; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP008218; BAF29537.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001066518.1; -.
UniGene Os.78608
3D structure databases
ModBase Q0IP28.
Organism-specific databases
Gramene Q2QUK8; -.
Family and domain databases
InterPro IPR001117; Cu-oxidase.
IPR011706; Cu-oxidase_2.
IPR011707; Cu-oxidase_3.
IPR002355; Cu_oxidase_Cu_BS.
IPR008972; Cupredoxin.
IPR017761; Laccase.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.420; Cupredoxin; 3.
Pfam PF00394; Cu-oxidase; 1.
PF07731; Cu-oxidase_2; 1.
PF07732; Cu-oxidase_3; 1.
Pfam graphical view of domain structure.
PROSITE PS00079; MULTICOPPER_OXIDASE1; FALSE_NEG.
PS00080; MULTICOPPER_OXIDASE2; 1.
BLOCKS Q0IP28.
Genome annotation databases
GeneID 4351917; -.
KEGG osa:4351917; -.
Other
ProtoNet Q0IP28.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Apoplast; Copper; Glycoprotein; Lignin degradation; Metal-binding; Oxidoreductase; Repeat; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    22  22     Potential. 
CHAIN   23   577  555     Laccase-25. PRO_0000291912
DOMAIN   30   147  118     Plastocyanin-like 1. 
DOMAIN   158   313  156     Plastocyanin-like 2. 
DOMAIN   423   560  138     Plastocyanin-like 3. 
METAL   81    81        Copper 1 (By similarity). 
METAL   83    83        Copper 2 (By similarity). 
METAL   126   126        Copper 2 (By similarity). 
METAL   128   128        Copper 3 (By similarity). 
METAL   477   477        Copper 4 (By similarity). 
METAL   480   480        Copper 1 (By similarity). 
METAL   482   482        Copper 3 (By similarity). 
METAL   539   539        Copper 3 (By similarity). 
METAL   540   540        Copper 4 (By similarity). 
METAL   541   541        Copper 2 (By similarity). 
METAL   545   545        Copper 4 (By similarity). 
CARBOHYD   33    33        N-linked (GlcNAc...) (Potential). 
CARBOHYD   109   109        N-linked (GlcNAc...) (Potential). 
CARBOHYD   169   169        N-linked (GlcNAc...) (Potential). 
CARBOHYD   203   203        N-linked (GlcNAc...) (Potential). 
CARBOHYD   208   208        N-linked (GlcNAc...) (Potential). 
CARBOHYD   218   218        N-linked (GlcNAc...) (Potential). 
CARBOHYD   332   332        N-linked (GlcNAc...) (Potential). 
CARBOHYD   383   383        N-linked (GlcNAc...) (Potential). 
CARBOHYD   396   396        N-linked (GlcNAc...) (Potential). 
CARBOHYD   404   404        N-linked (GlcNAc...) (Potential). 
CARBOHYD   441   441        N-linked (GlcNAc...) (Potential). 
CARBOHYD   459   459        N-linked (GlcNAc...) (Potential). 
Sequence information
Length: 577 AA [This is the length of the unprocessed precursor] Molecular weight: 63680 Da [This is the MW of the unprocessed precursor] CRC64: CA6FE93780DD7AA1 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MTLHWSLLLF IAIALVSSVA QAAVVEHTFN VGNFSISQLC QPPLIITAVN GQLPGPTIYA 

        70         80         90        100        110        120 
REGDTVVVHL VNTSPYSMTL HWHGVLQRGT PWADGPAMVT QCPVQPGGNY TYRFNVDGQE 

       130        140        150        160        170        180 
GTLWWHAHVS FHRATVYGAL VIRPRGGAKA YPFPKPDKEH VVILGEWWNA TVYDMERMAF 

       190        200        210        220        230        240 
LTGIPAPHAD AYTINGKPGD FYNCSAPNQT AKFEVRQNGT YLLRIINAGM NTPLFFKVAK 

       250        260        270        280        290        300 
HRLTVVGADA CYTKPYKTDV VVVSPGQTVD ALMVASAAVG RYYMAASPYD SAIPQGPPFS 

       310        320        330        340        350        360 
DTTATAILQY AGARRKTVRW RPPVLPRRPP VNDTATAHRF FSGMTALLRH GKPSAVPLAV 

       370        380        390        400        410        420 
DTHMYVTVGL GVSLCQPEQL LCNRSAPPVF SSSMNNASFV VPKNTSLLEA HFRREPAGVY 

       430        440        450        460        470        480 
TRDFPDTPPV VFDYTGDESD NATMQFTTKS TKVKTLRYNE TVEMVLQNTR LIAKESHPMH 

       490        500        510        520        530        540 
IHGFNFFILA QGFGNYDKRR AERRFNLVDP QERNTIAVPT GGWAVIRFVA DNPGMWYMHC 

       550        560        570 
HFDAHISLGL AMVLEVLDGP TPETSVPPPP ADLPRCS 

Q0IP28 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
 Hosted by kr flag YPRC Korea Mirror sites: Australia  Brazil  Canada  China  Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!