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UniProtKB/Swiss-Prot entry Q0DHL5


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name LAC11_ORYSJ
Primary accession number Q0DHL5
Secondary accession number A3B4S2
Integrated into Swiss-Prot on June 26, 2007
Sequence was last modified on June 26, 2007 (Sequence version 2)
Annotations were last modified on    September 2, 2008 (Entry version 18)
Name and origin of the protein
Protein name Putative laccase-11
Synonyms EC 1.10.3.2
Benzenediol:oxygen oxidoreductase 11
Urishiol oxidase 11
Diphenol oxidase 11
Gene name
Name: LAC11
OrderedLocusNames: Os05g0458300, LOC_Os05g38390
ORFNames: OsJ_018044
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 5: Uncertain;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1007/s00438-005-0039-y; PubMed=16261349 [NCBI, ExPASy, EBI, Israel, Japan]
Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J., Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F., Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
"A fine physical map of the rice chromosome 5.";
Mol. Genet. Genomics 274:337-345(2005).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature03895; PubMed=16100779 [NCBI, ExPASy, EBI, Israel, Japan]
International rice genome sequencing project (IRGSP);
"The map-based sequence of the rice genome.";
Nature 436:793-800(2005).
[3]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
DOI=10.1101/gr.5509507; PubMed=17210932 [NCBI, ExPASy, EBI, Israel, Japan]
The rice annotation project (RAP);
"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.";
Genome Res. 17:175-183(2007).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1371/journal.pbio.0030038; PubMed=15685292 [NCBI, ExPASy, EBI, Israel, Japan]
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
"The genomes of Oryza sativa: a history of duplications.";
PLoS Biol. 3:266-281(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AP008211; BAF17658.1; ALT_SEQ; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CM000142; EAZ34561.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001055744.1; -.
UniGene Os.80267
3D structure databases
ModBase Q0DHL5.
Family and domain databases
InterPro IPR001117; Cu-oxidase.
IPR011707; Cu-oxidase_3.
IPR002355; Cu_oxidase_Cu_BS.
IPR008972; Cupredoxin.
IPR017761; Laccase.
Graphical view of domain structure.
Gene3D G3DSA:2.60.40.420; Cupredoxin; 1.
Pfam PF00394; Cu-oxidase; 1.
PF07732; Cu-oxidase_3; 1.
Pfam graphical view of domain structure.
PROSITE PS00079; MULTICOPPER_OXIDASE1; 1.
PS00080; MULTICOPPER_OXIDASE2; 1.
BLOCKS Q0DHL5.
Genome annotation databases
GeneID 4339001; -.
KEGG osa:4339001; -.
Other
ProtoNet Q0DHL5.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Apoplast; Copper; Lignin degradation; Metal-binding; Oxidoreductase; Repeat; Secreted.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   540  540     Putative laccase-11. PRO_0000291896
DOMAIN   1   114  114     Plastocyanin-like 1. 
DOMAIN   124   279  156     Plastocyanin-like 2. 
DOMAIN   389   523  135     Plastocyanin-like 3. 
METAL   48    48        Copper 1 (By similarity). 
METAL   50    50        Copper 2 (By similarity). 
METAL   93    93        Copper 2 (By similarity). 
METAL   95    95        Copper 3 (By similarity). 
METAL   440   440        Copper 4 (By similarity). 
METAL   443   443        Copper 1 (By similarity). 
METAL   445   445        Copper 3 (By similarity). 
METAL   502   502        Copper 3 (By similarity). 
METAL   503   503        Copper 4 (By similarity). 
METAL   504   504        Copper 2 (By similarity). 
METAL   508   508        Copper 4 (By similarity). 
Sequence information
Length: 540 AA [This is the length of the unprocessed precursor] Molecular weight: 58622 Da [This is the MW of the unprocessed precursor] CRC64: C35A55C8FA490CF7 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MATVTRLCVT KSVPTVNGQF PGPKLVVREG DTLVIRVTNN INNNVTFHWH GIRQVRSGWA 

        70         80         90        100        110        120 
DGPAYITQCP IRSGGSYVYR FTVTGQRGTL WWHAHFSWLR ATLYGPLVIL PPRGVAYPFP 

       130        140        150        160        170        180 
KPHREVPLLL GEWFNADPEA VIKQALQTGG GPNVSDAYTF NGLPGPTYNC SSSNDTFKLR 

       190        200        210        220        230        240 
VRPGKTYLLR LINAALNDEL FFGVANHTLM VVQADASYVK PFAATALVIS PGQTMDVLLT 

       250        260        270        280        290        300 
AAANNPPSRS FAIAVAPYTN TVGTFDNTTA VAVLEYYGAA TSAAALRSLP LPSLPAYNDT 

       310        320        330        340        350        360 
GAVANFSASF RSLASAQYPA RVPRTVDRHF FFAVGLGADP CQSPVNGTCQ GPNNTRFAAS 

       370        380        390        400        410        420 
MNNVSFVMPR TSLLQAHYQR RYNGVLAANF PAAPRTPFNY TGTPPNNTFV THGTRVVPLS 

       430        440        450        460        470        480 
FNTTVEVVLQ DTSILGAESH PLHLHGYDFY VVGTGFGNYD ASNDTAKYNL VDPVQRNTIS 

       490        500        510        520        530        540 
VPTAGWVAIR FVADNPGVWI MHCHLDVHLS WGLSMAWLVN DGPLPNQKLP PPPSDIPMCS 

Q0DHL5 in FASTA format

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