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UniProtKB/Swiss-Prot entry Q08477


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name CP4F3_HUMAN
Primary accession number Q08477
Secondary accession numbers O60634 Q5U740
Integrated into Swiss-Prot on February 1, 1995
Sequence was last modified on December 21, 2004 (Sequence version 2)
Annotations were last modified on    December 16, 2008 (Entry version 85)
Name and origin of the protein
Protein name Cytochrome P450 4F3
Synonyms EC 1.14.13.30
CYPIVF3
Leukotriene-B(4) omega-hydroxylase
Leukotriene-B(4) 20-monooxygenase
Cytochrome P450-LTB-omega
Gene name
Name: CYP4F3
Synonyms: LTB4H
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT ASP-269.
TISSUE=Leukocyte;
PubMed=8486631 [NCBI, ExPASy, EBI, Israel, Japan]
Kikuta Y., Kusunose E., Endo K., Yamamoto S., Sogawa K., Fujii-Kuriyama Y., Kusunose M.;
"A novel form of cytochrome P-450 family 4 in human polymorphonuclear leukocytes. cDNA cloning and expression of leukotriene B4 omega-hydroxylase.";
J. Biol. Chem. 268:9376-9380(1993).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], AND VARIANT ASP-269.
PubMed=9539102 [NCBI, ExPASy, EBI, Israel, Japan]
Kikuta Y., Kato M., Yamashita Y., Miyauchi Y., Tanaka K., Kamada N., Kusunose M.;
"Human leukotriene B4 omega-hydroxylase (CYP4F3) gene: molecular cloning and chromosomal localization.";
DNA Cell Biol. 17:221-230(1998).
[3]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Fetal liver;
Peng X., Morgan K., Morgan T.R.;
"A novel form of cytochrome P-450 family 4 in human fetal liver.";
Submitted (MAR-1998) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANTS ASP-269; ILE-270 AND THR-271.
SeattleSNPs program for genomic applications;
Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
D12620; BAA02144.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
D12621; BAA02145.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB002454; BAA25990.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB002461; BAA25991.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF054821; AAC08589.1; ALT_FRAME; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY792513; AAV40834.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A46661; A46661.
RefSeq NP_000887.2; -.
UniGene Hs.106242
3D structure databases
HSSP P14779; 1JME. [HSSP ENTRY / PDB]
ModBase Q08477.
Organism-specific databases
GeneCards GC19P015612; -.
H-InvDB HIX0058774; -.
HGNC HGNC:2646; CYP4F3.
GenAtlas CYP4F3.
MIM 601270; gene. [NCBI / EBI]
PharmGKB PA234; -.
GeneCards Q08477.
Gene expression databases
ArrayExpress Q08477; -.
CleanEx HS_CYP4F3; -.
GermOnline ENSG00000186529; Homo sapiens.
Ontologies
GO
GO:0005789; Cellular component: endoplasmic reticulum membrane (inferred from electronic annotation from UniProtKB-SubCell).
GO:0016021; Cellular component: integral to membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0005792; Cellular component: microsome (inferred from electronic annotation from UniProtKB-KW).
GO:0009055; Molecular function: electron carrier activity (inferred from electronic annotation from InterPro).
GO:0020037; Molecular function: heme binding (inferred from electronic annotation from InterPro).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from InterPro).
GO:0050051; Molecular function: leukotriene-B4 20-monooxygenase activity (inferred from electronic annotation from EC).
GO:0006691; Biological process: leukotriene metabolic process (traceable author statement from ProtInc).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR001128; Cyt_P450.
IPR002401; Cyt_P450_E_grp-I.
Graphical view of domain structure.
Gene3D G3DSA:1.10.630.10; Cyt_P450; 1.
PANTHER PTHR19383; Cyt_P450; 1.
Pfam PF00067; p450; 1.
Pfam graphical view of domain structure.
PRINTS PR00463; EP450I.
PR00385; P450.
PROSITE PS00086; CYTOCHROME_P450; 1.
Proteomics databases
PRIDE Q08477; -.
Genome annotation databases
Ensembl ENSG00000186529; Homo sapiens. [Contig view]
GeneID 4051; -.
KEGG hsa:4051; -.
NMPDR fig|9606.3.peg.15898; -.
Phylogenomic databases
HOGENOM Q08477; -.
HOVERGEN Q08477; -.
Other
LinkHub Q08477; -.
NextBio 15870; -.
SOURCE CYP4F3; Homo sapiens.
ProtoNet Q08477.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Endoplasmic reticulum; Heme; Iron; Membrane; Metal-binding; Microsome; Monooxygenase; NADP; Oxidoreductase; Polymorphism; Transmembrane.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   520  520     Cytochrome P450 4F3. PRO_0000051851
TRANSMEM   11    31  21     Potential. 
METAL   468   468        Iron (heme axial ligand) (By similarity). 
BINDING   328   328        Heme (covalent; via 1 link) (By similarity). 
VARIANT   96    96  1     H -> Q (in dbSNP:rs34923393 [NCBI]). VAR_048457 
VARIANT   106   106  1     Y -> C (in dbSNP:rs35888783 [NCBI]). VAR_048458 
VARIANT   269   269  1     A -> D (in dbSNP:rs1805040 [NCBI]). VAR_001258 
VARIANT   270   270  1     V -> I. VAR_020664 
VARIANT   271   271  1     I -> T. VAR_020665 
CONFLICT   184   186        EGS -> KGY (in Ref. 3; AAC08589). 
CONFLICT   488   488        R -> A (in Ref. 1 and 2). 
CONFLICT   512   512        L -> I (in Ref. 3; AAC08589). 
Sequence information
Length: 520 AA [This is the length of the unprocessed precursor] Molecular weight: 59847 Da [This is the MW of the unprocessed precursor] CRC64: 2519D875280CF9DC [This is a checksum on the sequence]
        10         20         30         40         50         60 
MPQLSLSSLG LWPMAASPWL LLLLVGASWL LARILAWTYT FYDNCCRLRC FPQPPKRNWF 

        70         80         90        100        110        120 
LGHLGLIHSS EEGLLYTQSL ACTFGDMCCW WVGPWHAIVR IFHPTYIKPV LFAPAAIVPK 

       130        140        150        160        170        180 
DKVFYSFLKP WLGDGLLLSA GEKWSRHRRM LTPAFHFNIL KPYMKIFNES VNIMHAKWQL 

       190        200        210        220        230        240 
LASEGSARLD MFEHISLMTL DSLQKCVFSF DSHCQEKPSE YIAAILELSA LVTKRHQQIL 

       250        260        270        280        290        300 
LYIDFLYYLT PDGQRFRRAC RLVHDFTDAV IQERRRTLPS QGVDDFLQAK AKSKTLDFID 

       310        320        330        340        350        360 
VLLLSKDEDG KKLSDEDIRA EADTFMFEGH DTTASGLSWV LYHLAKHPEY QERCRQEVQE 

       370        380        390        400        410        420 
LLKDREPKEI EWDDLAQLPF LTMCIKESLR LHPPVPAVSR CCTQDIVLPD GRVIPKGIIC 

       430        440        450        460        470        480 
LISVFGTHHN PAVWPDPEVY DPFRFDPKNI KERSPLAFIP FSAGPRNCIG QAFAMAEMKV 

       490        500        510        520 
VLGLTLLRFR VLPDHTEPRR KPELVLRAEG GLWLRVEPLS 

Q08477 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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