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UniProtKB/Swiss-Prot entry Q06562


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name XYN1_COCCA
Primary accession number Q06562
Secondary accession numbers None
Integrated into Swiss-Prot on February 1, 1995
Sequence was last modified on February 1, 1995 (Sequence version 1)
Annotations were last modified on    June 16, 2009 (Entry version 58)
Name and origin of the protein
Protein name Endo-1,4-beta-xylanase I [Precursor]
Synonyms Xylanase I
EC 3.2.1.8
1,4-beta-D-xylan xylanohydrolase 1
Gene name
Name: XYL1
From
Cochliobolus carbonum (Bipolaris zeicola) [TaxID: 5017] 
Taxonomy Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporaceae; Cochliobolus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=Race 1 / Isolate SB111;
PubMed=8400376 [NCBI, ExPASy, EBI, Israel, Japan]
Apel P.C., Panaccione D.G., Holden F.R., Walton J.D.;
"Cloning and targeted gene disruption of XYL1, a beta 1,4-xylanase gene from the maize pathogen Cochliobolus carbonum.";
Mol. Plant Microbe Interact. 6:467-473(1993).
[2]
PARTIAL PROTEIN SEQUENCE.
DOI=10.1016/0885-5765(92)90070-C; AGRICOLA=IND92046127
Holden F.R., Walton J.D.;
"Xylanases from the fungal maize pathogen Cochliobolus carbonum.";
Physiol. Mol. Plant Pathol. 40:39-47(1992).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
L13596; AAA33024.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
HSSP O43097; 1YNA. [HSSP ENTRY / PDB]
SMR Q06562; 31-218.
ModBase Q06562.
Protein family/group databases
CAZy GH11; Glycoside Hydrolase Family 11.
Enzyme and pathway databases
BRENDA 3.2.1.8; 97658.
Ontologies
GO
GO:0005576; Cellular component: extracellular region (inferred from electronic annotation from UniProtKB-SubCell).
GO:0031176; Molecular function: endo-1,4-beta-xylanase activity (inferred from electronic annotation from EC).
GO:0045493; Biological process: xylan catabolic process (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR001137; Glyco_hydro_11.
IPR013319; Glyco_hydro_11/12_cat.
IPR018208; Glyco_hydro_11_AS.
Graphical view of domain structure.
Gene3D G3DSA:2.60.120.180; Glyco_hydro_11/12_cat; 1.
Pfam PF00457; Glyco_hydro_11; 1.
Pfam graphical view of domain structure.
PRINTS PR00911; GLHYDRLASE11.
PROSITE PS00776; GLYCOSYL_HYDROL_F11_1; 1.
PS00777; GLYCOSYL_HYDROL_F11_2; 1.
Other
ProtoNet Q06562.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Direct protein sequencing; Glycosidase; Hydrolase; Secreted; Signal; Xylan degradation.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
SIGNAL   1    30  30     Potential. 
CHAIN   31   221  191     Endo-1,4-beta-xylanase I. PRO_0000008003
ACT_SITE   115   115        Nucleophile (By similarity). 
ACT_SITE   206   206        Proton donor (By similarity). 
CONFLICT   81    81        W -> I (in Ref. 2; AA sequence). 
CONFLICT   107   107        G -> A (in Ref. 2; AA sequence). 
CONFLICT   131   131        S -> W (in Ref. 2; AA sequence). 
Sequence information
Length: 221 AA [This is the length of the unprocessed precursor] Molecular weight: 23728 Da [This is the MW of the unprocessed precursor] CRC64: 59DBD8983FC5B08C [This is a checksum on the sequence]
        10         20         30         40         50         60 
MVSFTSIITA AVAATGALAA PATDVSLVAR QNTPNGEGTH NGCFWSWWSD GGARATYTNG 

        70         80         90        100        110        120 
AGGSYSVSWG SGGNLVGGKG WNPGTARTIT YSGTYNYNGN SYLAVYGWTR NPLVEYYVVE 

       130        140        150        160        170        180 
NFGTYDPSSQ SQNKGTVTSD GSSYKIAQST RTNQPSIDGT RTFQQYWSVR QNKRSSGSVN 

       190        200        210        220 
MKTHFDAWAS KGMNLGQHYY QIVATEGYFS TGNAQITVNC P 

Q06562 in FASTA format

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