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UniProtKB/Swiss-Prot entry Q06437


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ODPAT_RAT
Primary accession number Q06437
Secondary accession numbers None
Integrated into Swiss-Prot on June 1, 1994
Sequence was last modified on June 1, 1994 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 61)
Name and origin of the protein
Protein name Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial [Precursor]
Synonyms EC 1.2.4.1
PDHE1-A type II
Gene name
Name: Pdha2
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Testis;
DOI=10.1016/0167-4781(93)90054-H; PubMed=7916643 [NCBI, ExPASy, EBI, Israel, Japan]
Cullingford T.E., Clark J.B., Phillips I.R.;
"Characterization of cDNAs encoding the rat testis-specific E1 alpha subunit of the pyruvate dehydrogenase complex: comparison of expression of the corresponding mRNA with that of the somatic E1 alpha subunit.";
Biochim. Biophys. Acta 1216:149-153(1993).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=Sprague-Dawley;
TISSUE=Testis;
DOI=10.1016/S0305-0491(98)10010-X; PubMed=9787790 [NCBI, ExPASy, EBI, Israel, Japan]
Jeng J., Kallarakal A.T., Kim S.F., Popov K.M., Song B.J.;
"Pyruvate dehydrogenase E1 alpha isoform in rat testis: cDNA cloning, characterization, and biochemical comparison of the recombinant testis and liver enzymes.";
Comp. Biochem. Physiol. 120B:205-216(1998).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Testis;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
Comments
  • FUNCTION: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).
  • CATALYTIC ACTIVITY: Pyruvate + [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine = [dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine + CO2.
  • COFACTOR: Thiamine pyrophosphate.
  • ENZYME REGULATION: E1 activity is regulated by phosphorylation (inactivation) and dephosphorylation (activation) of the alpha subunit.
  • SUBUNIT: Tetramer of 2 alpha and 2 beta subunits.
  • SUBCELLULAR LOCATION: Mitochondrion (Probable).
  • TISSUE SPECIFICITY: Testis.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
Z18878; CAA79318.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U44125; AAB68458.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC078757; AAH78757.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S31416; S31416.
RefSeq NP_446446.1; -.
UniGene Rn.11126
3D structure databases
HSSP P08559; 1NI4. [HSSP ENTRY / PDB]
SMR Q06437; 31-391.
ModBase Q06437.
Organism-specific databases
RGD 620095; Pdha2.
Gene expression databases
ArrayExpress Q06437; -.
GermOnline ENSRNOG00000016223; Rattus norvegicus.
Ontologies
GO
GO:0004739; Molecular function: pyruvate dehydrogenase (acetyl-transferring) activity (inferred from electronic annotation from EC).
QuickGo view.
Family and domain databases
InterPro IPR001017; DHase_E1.
IPR017597; Pyrv_DH_E1_asu_subgrp-y.
Graphical view of domain structure.
Pfam PF00676; E1_dh; 1.
Pfam graphical view of domain structure.
BLOCKS Q06437.
Genome annotation databases
Ensembl ENSRNOG00000016223; Rattus norvegicus. [Contig view]
GeneID 117098; -.
KEGG rno:117098; -.
NMPDR fig|10116.3.peg.17098; -.
Phylogenomic databases
HOVERGEN Q06437; -.
Other
ProtoNet Q06437.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Glycolysis; Mitochondrion; Oxidoreductase; Phosphoprotein; Pyruvate; Thiamine pyrophosphate; Transit peptide.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
TRANSIT   1    30  30     Mitochondrion (By similarity). 
CHAIN   31   391  361     Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial. PRO_0000020449
MOD_RES   294   294        Phosphoserine (By similarity). 
MOD_RES   301   301        Phosphoserine (By similarity). 
Sequence information
Length: 391 AA [This is the length of the unprocessed precursor] Molecular weight: 43393 Da [This is the MW of the unprocessed precursor] CRC64: 5BF049BEE483EF5D [This is a checksum on the sequence]
        10         20         30         40         50         60 
MRKMLATVLS QVFSGMVQKP ALRGLLSSLK FSNDATCDIK KCDLYLLEQG PPTSTVLTRE 

        70         80         90        100        110        120 
EALKYYRNMQ VIRRMELKAD QLYKQKFIRG FCHLCDGQEA CNVGLEAGIN PTDHIITSYR 

       130        140        150        160        170        180 
AHGLCYTRGL SVKSILAELT GRKGGCAKGK GGSMHMYAKN FYGGNGIVGA QVPLGAGVAL 

       190        200        210        220        230        240 
ACKYLKNGQI CLALYGDGAA NQGQVFEAYN MSALWKLPCV FICENNRYGM GTAIERSAAS 

       250        260        270        280        290        300 
TDYHKKGFVI PGLRVNGMDI LSVREATKFA ADHCRSGKGP IVMELQTYRY HGHSMSDPGI 

       310        320        330        340        350        360 
SYRTREEVQN VRSKSDPIML LRERMISNNL SSVEELKEID ADVKKEVEEA AQFATTDPEP 

       370        380        390 
PLEDLANYLY HQNPPFEVRG AHKWLKFKSV S 

Q06437 in FASTA format

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