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UniProtKB/Swiss-Prot entry P78329


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name CP4F2_HUMAN
Primary accession number P78329
Secondary accession numbers Q16677 Q6NWT4 Q6NWT6 Q9NNZ0 Q9UIU8
Integrated into Swiss-Prot on December 15, 1998
Sequence was last modified on May 1, 1997 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 80)
Name and origin of the protein
Protein name Cytochrome P450 4F2
Synonyms EC 1.14.13.30
CYPIVF2
Leukotriene-B(4) omega-hydroxylase
Leukotriene-B(4) 20-monooxygenase
Cytochrome P450-LTB-omega
Gene name
Name: CYP4F2
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Liver;
DOI=10.1016/0014-5793(94)00587-7; PubMed=8026587 [NCBI, ExPASy, EBI, Israel, Japan]
Kikuta Y., Kusunose E., Kondo T., Yamamoto S., Kinoshita H., Kusunose M.;
"Cloning and expression of a novel form of leukotriene B4 omega-hydroxylase from human liver.";
FEBS Lett. 348:70-74(1994).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Liver;
Chen L., Hardwick J.P.;
"The human liver CYP4F2 cDNA sequence and expression in baculovirus-infected insect cells.";
Submitted (JUL-2000) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1089/104454999315006; PubMed=10492403 [NCBI, ExPASy, EBI, Israel, Japan]
Kikuta Y., Miyauchi Y., Kusunose E., Kusunose M.;
"Expression and molecular cloning of human liver leukotriene B4 omega-hydroxylase (CYP4F2) gene.";
DNA Cell Biol. 18:723-730(1999).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANTS TYR-7; GLY-12; VAL-185; MET-433 AND MET-519.
SeattleSNPs program for genomic applications;
Submitted (JAN-2002) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1038/nature02399; PubMed=15057824 [NCBI, ExPASy, EBI, Israel, Japan]
Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V., Caoile C., Chan Y.M., Christensen M., Cleland C.A., Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J., Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M., Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W., Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V., Leem S.-H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D., McCready P.M., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I., Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L., Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., Rubin E.M., Lucas S.M.;
"The DNA sequence and biology of human chromosome 19.";
Nature 428:529-535(2004).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANTS GLY-12 AND MET-433.
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[7]
NUCLEOTIDE SEQUENCE OF 1-175.
TISSUE=Liver;
DOI=10.1006/abbi.2000.1836; PubMed=10860554 [NCBI, ExPASy, EBI, Israel, Japan]
Zhang X., Chen L., Hardwick J.P.;
"Promoter activity and regulation of the CYP4F2 leukotriene B4 omega hydroxylase gene by peroxisomal proliferators and retinoic acid in HepG2 cells.";
Arch. Biochem. Biophys. 378:364-376(2000).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
D26480; BAA05490.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U02388; AAC50052.2; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB015306; BAA75823.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF467894; AAL67578.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AC005336; AAC27730.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC067437; AAH67437.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC067439; AAH67439.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC067440; AAH67440.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF221943; AAF86378.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S45702; S45702.
RefSeq NP_001073.3; -.
UniGene Hs.558423
3D structure databases
HSSP P14779; 1JME. [HSSP ENTRY / PDB]
ModBase P78329.
Organism-specific databases
H-InvDB HIX0014854; -.
HIX0040119; -.
HGNC HGNC:2645; CYP4F2.
GenAtlas CYP4F2.
HPA HPA014048; -.
MIM 604426; gene. [NCBI / EBI]
PharmGKB PA27121; -.
GeneCards P78329.
Gene expression databases
ArrayExpress P78329; -.
CleanEx HS_CYP4F2; -.
GermOnline ENSG00000186115; Homo sapiens.
Ontologies
GO
GO:0004497; Molecular function: monooxygenase activity (traceable author statement from ProtInc).
GO:0006691; Biological process: leukotriene metabolic process (traceable author statement from ProtInc).
QuickGo view.
Family and domain databases
InterPro IPR001128; Cyt_P450.
IPR002401; Cyt_P450_E_grp-I.
Graphical view of domain structure.
Gene3D G3DSA:1.10.630.10; Cyt_P450; 1.
PANTHER PTHR19383; Cyt_P450; 1.
Pfam PF00067; p450; 1.
Pfam graphical view of domain structure.
PRINTS PR00463; EP450I.
PR00385; P450.
PROSITE PS00086; CYTOCHROME_P450; 1.
BLOCKS P78329.
Genome annotation databases
Ensembl ENSG00000186115; Homo sapiens. [Contig view]
GeneID 8529; -.
KEGG hsa:8529; -.
Phylogenomic databases
HOGENOM P78329; -.
HOVERGEN P78329; -.
Other
LinkHub P78329; -.
SOURCE CYP4F2; Homo sapiens.
ProtoNet P78329.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Endoplasmic reticulum; Heme; Iron; Membrane; Metal-binding; Microsome; Monooxygenase; NADP; Oxidoreductase; Polymorphism.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   520  520     Cytochrome P450 4F2. PRO_0000051850
METAL   468   468        Iron (heme axial ligand) (By similarity). 
BINDING   328   328        Heme (covalent; via 1 link) (By similarity). 
VARIANT   7     7  1     S -> Y (in dbSNP:rs3093104 [NCBI]). VAR_013116 
VARIANT   12    12  1     W -> G (in dbSNP:rs3093105 [NCBI]). VAR_013117 
VARIANT   185   185  1     G -> V (in dbSNP:rs3093153 [NCBI]). VAR_013118 
VARIANT   269   269  1     A -> D (in dbSNP:rs1805040 [NCBI]). VAR_020125 
VARIANT   433   433  1     V -> M (in dbSNP:rs2108622 [NCBI]). VAR_013119 
VARIANT   519   519  1     L -> M (in dbSNP:rs3093200 [NCBI]). VAR_013120 
CONFLICT   12    13        WP -> CR (in Ref. 2 and 7). 
CONFLICT   25    25        V -> A (in Ref. 6; AAH67437). 
CONFLICT   169   169        E -> D (in Ref. 6; AAH67440). 
CONFLICT   336   336        G -> V (in Ref. 2; AAC50052). 
CONFLICT   391   391        L -> V (in Ref. 2; AAC50052). 
Sequence information
Length: 520 AA [This is the length of the unprocessed precursor] Molecular weight: 59853 Da [This is the MW of the unprocessed precursor] CRC64: 1791F9E6EECB59B5 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSQLSLSWLG LWPVAASPWL LLLLVGASWL LAHVLAWTYA FYDNCRRLRC FPQPPRRNWF 

        70         80         90        100        110        120 
WGHQGMVNPT EEGMRVLTQL VATYPQGFKV WMGPISPLLS LCHPDIIRSV INASAAIAPK 

       130        140        150        160        170        180 
DKFFYSFLEP WLGDGLLLSA GDKWSRHRRM LTPAFHFNIL KPYMKIFNES VNIMHAKWQL 

       190        200        210        220        230        240 
LASEGSACLD MFEHISLMTL DSLQKCVFSF DSHCQEKPSE YIAAILELSA LVSKRHHEIL 

       250        260        270        280        290        300 
LHIDFLYYLT PDGQRFRRAC RLVHDFTDAV IQERRRTLPS QGVDDFLQAK AKSKTLDFID 

       310        320        330        340        350        360 
VLLLSKDEDG KKLSDEDIRA EADTFMFEGH DTTASGLSWV LYHLAKHPEY QERCRQEVQE 

       370        380        390        400        410        420 
LLKDREPKEI EWDDLAHLPF LTMCMKESLR LHPPVPVISR HVTQDIVLPD GRVIPKGIIC 

       430        440        450        460        470        480 
LISVFGTHHN PAVWPDPEVY DPFRFDPENI KERSPLAFIP FSAGPRNCIG QTFAMAEMKV 

       490        500        510        520 
VLALTLLRFR VLPDHTEPRR KPELVLRAEG GLWLRVEPLS 

P78329 in FASTA format

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