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UniProtKB/Swiss-Prot entry P55083


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name MFAP4_HUMAN
Primary accession number P55083
Secondary accession number Q6P680
Integrated into Swiss-Prot on October 1, 1996
Sequence was last modified on November 1, 1997 (Sequence version 2)
Annotations were last modified on    December 16, 2008 (Entry version 66)
Name and origin of the protein
Protein name Microfibril-associated glycoprotein 4 [Precursor]
Synonyms None
Gene name
Name: MFAP4
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Placenta;
DOI=10.1093/hmg/4.4.589; PubMed=7633408 [NCBI, ExPASy, EBI, Israel, Japan]
Zhao Z., Lee C.-C., Jiralerspong S., Juyal R.C., Lu F., Baldini A., Greenberg F., Caskey C.T., Patel P.I.;
"The gene for a human microfibril-associated glycoprotein is commonly deleted in Smith-Magenis syndrome patients.";
Hum. Mol. Genet. 4:589-597(1995).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=PNS;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[3]
PROTEIN SEQUENCE OF 22-36.
DOI=10.1110/ps.04682504; PubMed=15340161 [NCBI, ExPASy, EBI, Israel, Japan]
Zhang Z., Henzel W.J.;
"Signal peptide prediction based on analysis of experimentally verified cleavage sites.";
Protein Sci. 13:2819-2824(2004).
[4]
GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-137, AND MASS SPECTROMETRY.
TISSUE=Plasma;
DOI=10.1021/pr0502065; PubMed=16335952 [NCBI, ExPASy, EBI, Israel, Japan]
Liu T., Qian W.-J., Gritsenko M.A., Camp D.G. II, Monroe M.E., Moore R.J., Smith R.D.;
"Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry.";
J. Proteome Res. 4:2070-2080(2005).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
L38486; AAB00968.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC062415; AAH62415.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_002395.1; -.
UniGene Hs.296049
3D structure databases
HSSP P02671; 1FZD. [HSSP ENTRY / PDB]
ModBase P55083.
Organism-specific databases
GeneCards GC17M019227; -.
H-InvDB HIX0039181; -.
HGNC HGNC:7035; MFAP4.
GenAtlas MFAP4.
MIM 182290; phenotype. [NCBI / EBI]
600596; gene. [NCBI / EBI]
Orphanet 819; Smith-Magenis syndrome.
PharmGKB PA30771; -.
GeneCards P55083.
Gene expression databases
CleanEx HS_MFAP4; -.
GermOnline ENSG00000166482; Homo sapiens.
Ontologies
GO
GO:0001527; Cellular component: microfibril (non-traceable author statement from UniProtKB).
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0005102; Molecular function: receptor binding (inferred from electronic annotation from InterPro).
GO:0007155; Biological process: cell adhesion (non-traceable author statement from UniProtKB).
GO:0007165; Biological process: signal transduction (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR002181; Fibrinogen_a/b/g_C.
IPR014716; Fibrinogen_a/b/g_C_1.
Graphical view of domain structure.
Gene3D G3DSA:3.90.215.10; Fibrinogen_a/b/g_C_1; 1.
Pfam PF00147; Fibrinogen_C; 1.
Pfam graphical view of domain structure.
SMART SM00186; FBG; 1.
SMART graphical view of domain structure.
PROSITE PS00514; FIBRINOGEN_C_1; FALSE_NEG.
PS51406; FIBRINOGEN_C_2; 1.
PROSITE graphical view of domain structure (profiles).
Proteomics databases
PRIDE P55083; -.
Genome annotation databases
Ensembl ENSG00000166482; Homo sapiens. [Contig view]
GeneID 4239; -.
KEGG hsa:4239; -.
Phylogenomic databases
HOGENOM P55083; -.
HOVERGEN P55083; -.
Other
NextBio 16715; -.
SOURCE MFAP4; Homo sapiens.
ProtoNet P55083.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Cell adhesion; Direct protein sequencing; Extracellular matrix; Glycoprotein; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    21  21      
CHAIN   22   255  234     Microfibril-associated glycoprotein 4. PRO_0000009134
DOMAIN   32   255  224     Fibrinogen C-terminal. 
MOTIF   26    28  3     Cell attachment site (Potential). 
CARBOHYD   87    87        N-linked (GlcNAc...) (Potential). 
CARBOHYD   137   137        N-linked (GlcNAc...). 
CONFLICT   173   173        A -> V (in Ref. 2; AAH62415). 
Sequence information
Length: 255 AA [This is the length of the unprocessed precursor] Molecular weight: 28648 Da [This is the MW of the unprocessed precursor] CRC64: B8F0B47AC694435E [This is a checksum on the sequence]
        10         20         30         40         50         60 
MKALLALPLL LLLSTPPCAP QVSGIRGDAL ERFCLQQPLD CDDIYAQGYQ SDGVYLIYPS 

        70         80         90        100        110        120 
GPSVPVPVFC DMTTEGGKWT VFQKRFNGSV SFFRGWNDYK LGFGRADGEY WLGLQNMHLL 

       130        140        150        160        170        180 
TLKQKYELRV DLEDFENNTA YAKYADFSIS PNAVSAEEDG YTLFVAGFED GGAGDSLSYH 

       190        200        210        220        230        240 
SGQKFSTFDR DQDLFVQNCA ALSSGAFWFR SCHFANLNGF YLGGSHLSYA NGINWAQWKG 

       250 
FYYSLKRTEM KIRRA 

P55083 in FASTA format

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