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UniProtKB/Swiss-Prot entry P51652


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name AKC1H_RAT
Primary accession number P51652
Secondary accession number Q498E4
Integrated into Swiss-Prot on October 1, 1996
Sequence was last modified on October 1, 1996 (Sequence version 1)
Annotations were last modified on    December 16, 2008 (Entry version 65)
Name and origin of the protein
Protein name Aldo-keto reductase family 1 member C18
Synonyms EC 1.1.-.-
20-alpha-hydroxysteroid dehydrogenase
20-alpha-HSD
EC 1.1.1.149
HSD1
Gene name
Name: Akr1c18
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND PROTEIN SEQUENCE OF 257-269 AND 315-323.
STRAIN=Sprague-Dawley;
TISSUE=Corpus luteum;
DOI=10.1006/bbrc.1994.1844; PubMed=8024573 [NCBI, ExPASy, EBI, Israel, Japan]
Mao J., Duan W.R., Albarracin C.T., Parmer T.G., Gibori G.;
"Isolation and characterization of a rat luteal cDNA encoding 20 alpha-hydroxysteroid dehydrogenase.";
Biochem. Biophys. Res. Commun. 201:1289-1295(1994).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=Wistar Imamichi;
TISSUE=Ovary;
PubMed=8172618 [NCBI, ExPASy, EBI, Israel, Japan]
Miura R., Shiota K., Noda K., Yagi S., Ogawa T., Takahashi M.;
"Molecular cloning of cDNA for rat ovarian 20 alpha-hydroxysteroid dehydrogenase (HSD1).";
Biochem. J. 299:561-567(1994).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Ovary;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
PROTEIN SEQUENCE OF 233-243; 252-269 AND 315-323.
STRAIN=Sprague-Dawley;
TISSUE=Corpus luteum;
DOI=10.1210/en.134.6.2453; PubMed=8194472 [NCBI, ExPASy, EBI, Israel, Japan]
Albarracin C.T., Parmer T.G., Duan W.R., Nelson S.E., Gibori G.;
"Identification of a major prolactin-regulated protein as 20 alpha-hydroxysteroid dehydrogenase: coordinate regulation of its activity, protein content, and messenger ribonucleic acid expression.";
Endocrinology 134:2453-2460(1994).
[5]
PROTEIN SEQUENCE OF 3-21.
Noda K., Shiota K., Ogawa T., Yagi S., Takahashi M.;
J. Reprod. Dev. 39:169-173(1993).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
L32601; AAA40601.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
D14424; BAA03317.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC100248; AAI00249.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR JC2330; JC2330.
RefSeq NP_612519.1; -.
UniGene Rn.10030
3D structure databases
HSSP P23457; 1LWI. [HSSP ENTRY / PDB]
SMR P51652; 6-323.
ModBase P51652.
Organism-specific databases
RGD 708428; LOC171516.
Gene expression databases
ArrayExpress P51652; -.
GermOnline ENSRNOG00000017531; Rattus norvegicus.
Ontologies
GO
GO:0005829; Cellular component: cytosol (inferred from direct assay from MGI).
GO:0005625; Cellular component: soluble fraction (inferred from direct assay from MGI).
GO:0047006; Molecular function: 20-alpha-hydroxysteroid dehydrogenase activity (inferred from direct assay from MGI).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
GO:0042448; Biological process: progesterone metabolic process (inferred from direct assay from MGI).
QuickGo view.
Family and domain databases
InterPro IPR001395; Aldo/ket_red.
Graphical view of domain structure.
Gene3D G3DSA:3.20.20.100; Aldo/ket_red; 1.
PANTHER PTHR11732; Aldo/ket_red; 1.
Pfam PF00248; Aldo_ket_red; 1.
Pfam graphical view of domain structure.
PRINTS PR00069; ALDKETRDTASE.
ProDom PD000288; Aldo/ket_red; 1.
[Domain structure / List of seq. sharing at least 1 domain]
PROSITE PS00798; ALDOKETO_REDUCTASE_1; 1.
PS00062; ALDOKETO_REDUCTASE_2; 1.
PS00063; ALDOKETO_REDUCTASE_3; 1.
Proteomics databases
PRIDE P51652; -.
Genome annotation databases
Ensembl ENSRNOG00000017531; Rattus norvegicus. [Contig view]
GeneID 171516; -.
KEGG rno:171516; -.
Phylogenomic databases
HOVERGEN P51652; -.
Other
NextBio 622481; -.
ProtoNet P51652.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cytoplasm; Direct protein sequencing; NADP; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   323  323     Aldo-keto reductase family 1 member C18. PRO_0000124650
NP_BIND   13    22  10     NADP (Potential). 
NP_BIND   217   280  64     NADP (By similarity). 
ACT_SITE   55    55        Proton donor (By similarity). 
BINDING   117   117        Substrate (By similarity). 
SITE   54    54  1     Important for substrate specificity (By similarity). 
SITE   84    84  1     Lowers pKa of active site Tyr (By similarity). 
CONFLICT   242   242        C -> L (in Ref. 4; AA sequence). 
Sequence information
Length: 323 AA [This is the length of the unprocessed precursor] Molecular weight: 37300 Da [This is the MW of the unprocessed precursor] CRC64: D14270961515195E [This is a checksum on the sequence]
        10         20         30         40         50         60 
MNSKIQKMEL NDGHSIPVLG FGTYATEENL RKKSMESTKI AIDVGFRHID CSHLYQNEEE 

        70         80         90        100        110        120 
IGQAIVSKIE DGTVKREDIF YTSKLWSTSH RPELVRPSLE NSLRKLNLDY VDLYLIHFPV 

       130        140        150        160        170        180 
SLKPGDELLP QDEHGNLILD TVDLCDTWEA MEKCKDAGLA KSIGVSNFNR RQLEKILNKP 

       190        200        210        220        230        240 
GLKHRPVCNQ VECHLYLNQS KLLAYCKMND IVLVAYGALG TQRYKYCINE DTPVLLDDPI 

       250        260        270        280        290        300 
LCTMAKKYKR TPALIALRYQ LERGIVTLVK SFNEERIREN LQVFDFQLAS DDMEILDNLD 

       310        320 
RNLRYFPANM FKAHPNFPFS DEY 

P51652 in FASTA format

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