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UniProtKB/Swiss-Prot entry P51056


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ODO1_COXBU
Primary accession number P51056
Secondary accession numbers None
Integrated into Swiss-Prot on October 1, 1996
Sequence was last modified on May 9, 2003 (Sequence version 3)
Annotations were last modified on    July 22, 2008 (Entry version 59)
Name and origin of the protein
Protein name 2-oxoglutarate dehydrogenase E1 component
Synonyms EC 1.2.4.2
Alpha-ketoglutarate dehydrogenase
Gene name
Name: sucA
OrderedLocusNames: CBU_1399
From
Coxiella burnetii [TaxID: 777] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae; Coxiella.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=Nine Mile;
Schimmels J.A., Mallavia L.P.;
Submitted (FEB-1995) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=Nine Mile phase I;
Thiele D., Willems H., Oswald W., Krauss H.;
Submitted (MAR-1994) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Nine Mile phase I / RSA 493;
DOI=10.1073/pnas.0931379100; PubMed=12704232 [NCBI, ExPASy, EBI, Israel, Japan]
Seshadri R., Paulsen I.T., Eisen J.A., Read T.D., Nelson K.E., Nelson W.C., Ward N.L., Tettelin H., Davidsen T.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Brinkac L.M., Madupu R., Dodson R.J., Khouri H.M., Lee K.H., Carty H.A., Scanlan D., Heinzen R.A., Thompson H.A., Samuel J.E., Fraser C.M., Heidelberg J.F.;
"Complete genome sequence of the Q-fever pathogen, Coxiella burnetii.";
Proc. Natl. Acad. Sci. U.S.A. 100:5455-5460(2003).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-280.
STRAIN=Nine Mile;
DOI=10.1016/0378-1119(94)00888-Y; PubMed=7698664 [NCBI, ExPASy, EBI, Israel, Japan]
Heinzen R.A., Mo Y.-Y., Robertson S.J., Mallavia L.P.;
"Characterization of the succinate dehydrogenase-encoding gene cluster (sdh) from the rickettsia Coxiella burnetii.";
Gene 155:27-34(1995).
Comments
  • FUNCTION: The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).
  • CATALYTIC ACTIVITY: 2-oxoglutarate + [dihydrolipoyllysine-residue succinyltransferase] lipoyllysine = [dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine + CO2.
  • COFACTOR: Thiamine pyrophosphate.
  • SUBUNIT: Homodimer (By similarity).
  • SIMILARITY: Belongs to the alpha-ketoglutarate dehydrogenase family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U07789; AAA61785.1; -; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X77919; CAA54874.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AE016828; AAO90898.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L33409; AAA74135.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S42874; S42874.
RefSeq NP_820384.1; -.
3D structure databases
ModBase P51056.
Enzyme and pathway databases
BioCyc CBUR227377:CBU_1399-MON; -.
Family and domain databases
InterPro IPR011603; 2oxoglutarate_DHase_E1.
IPR001017; DHase_E1.
IPR005475; Transketo_Cen_R.
Graphical view of domain structure.
PANTHER PTHR23152; 2oxoglutarate_DH_E1; 1.
Pfam PF00676; E1_dh; 1.
PF02779; Transket_pyr; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000157; Oxoglu_dh_E1; 1.
TIGRFAMs TIGR00239; 2oxo_dh_E1; 1.
BLOCKS P51056.
Genome annotation databases
GeneID 1209305; -.
GenomeReviews AE016828_GR; CBU_1399.
KEGG cbu:CBU_1399; -.
NMPDR fig|227377.1.peg.1328; -.
TIGR CBU_1399; -.
Phylogenomic databases
HOGENOM P51056; -.
Other
ProtoNet P51056.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Glycolysis; Oxidoreductase; Thiamine pyrophosphate.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   934  934     2-oxoglutarate dehydrogenase E1 component. PRO_0000162190
CONFLICT   600   600        A -> R (in Ref. 1; AAA61785). 
CONFLICT   614   630        VGQDSRRGTFFHRHAVV -> SVKIPDEALFFIAMPLW (in Ref. 1; AAA61785). 
CONFLICT   778   782        PKSVL -> QKCA (in Ref. 1; AAA61785). 
CONFLICT   809   816        HDPKKITR -> RIRKKSPA (in Ref. 1; AAA61785). 
Sequence information
Length: 934 AA [This is the length of the unprocessed precursor] Molecular weight: 106723 Da [This is the MW of the unprocessed precursor] CRC64: 7FB8144F8E013E8D [This is a checksum on the sequence]
        10         20         30         40         50         60 
MPKITMQQFQ KNSYLADNNA GYIETLYENF LKDPHSVNEE WRSYFRTLTN GASTPDISHA 

        70         80         90        100        110        120 
TIREEFRELA RKPRSISPTA ITPAAEQAAV DLLIEGYRRF GHLNAKINPL GDNRPVDSRL 

       130        140        150        160        170        180 
ELGHYNLTES DFNKTFATYG LLNKPKATLK EIYTRLREIY CGSIGVQYST ISDERERNWL 

       190        200        210        220        230        240 
RDYVEQRLPS IEFDKETKRN ILQQLVTAES LEKYLDTKYV GQVRYSLEGG DSLIPLLDEL 

       250        260        270        280        290        300 
TKRARHQKIE EIVICMAHRG RVNVLLNIMG QSAAELFQEF EGKKDYGLMS GDVKYHRGYS 

       310        320        330        340        350        360 
RDVKTDAGPI HLSLAFNPSH LEFICPVAMG SVRARQERQN GHKRDYAMTV MIHGDASFSG 

       370        380        390        400        410        420 
EGIVMEALSM SQTRAHHVGG SIHIILNNQV GFTTSNPHDA RSSMYCSDIA KMLDAPVFHV 

       430        440        450        460        470        480 
NGDDPEAVVA VTQLALDYRM AFHKDVFIDL VCYRRHGHQE VDDPMPTQPA MYKVIQEHPT 

       490        500        510        520        530        540 
TRTLYAKNLI EKKLCTAEEV DQWIDDYRDR LDRGRQLVET LPEGLSAHYA ANWTPYLGQD 

       550        560        570        580        590        600 
WTTLVDTTLP LKKLKALGKK FSTLPNTLHL HRKVEAIYKA RLEMAEGKTP MDWGFAEMLA 

       610        620        630        640        650        660 
YASLLEEGFS VRLVGQDSRR GTFFHRHAVV FDQETGKEYE PLKHLSDKQA APHIYDSLLC 

       670        680        690        700        710        720 
EAGALGFEYG YSTADPNSLV IWEAQFGDFA NVAQVIVDQF ISSGWQKWNR LSGIVLFLPH 

       730        740        750        760        770        780 
GYEGKGPEHS SARLERYLQL CAQNNMQVCA PTTPSQIFHL LRRQVLRPYR KPLVVLTPKS 

       790        800        810        820        830        840 
VLRNKLAVSS LEDLARGQLK LLIPEIEKHD PKKITRVILC SGKVYYDLLA KRREHKGKLN 

       850        860        870        880        890        900 
HIAMIRIEQL YPFPYDELKA ELEKYPNAKQ VIWCQEEPKN QGAWFCTRHR LIKCMRDDQT 

       910        920        930 
LEYVGRSAFA APAAGYSALY VKLQEQLVNQ ALEI 

P51056 in FASTA format

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View entry in raw text format (no links)
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