[1]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 1-20.
STRAIN=K12;
DOI=10.1007/BF00273586; PubMed=2034230 [NCBI, ExPASy, EBI, Israel, Japan]
Vasudevan S.G.,
Armarego W.L.F.,
Shaw D.C.,
Lilley P.E.,
Dixon N.E.,
Poole R.K.;
"Isolation and nucleotide sequence of the hmp gene that encodes a haemoglobin-like protein in Escherichia coli K-12.";
Mol. Gen. Genet. 226:49-58(1991).
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[2]
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NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
DOI=10.1093/dnares/4.2.91; PubMed=9205837 [NCBI, ExPASy, EBI, Israel, Japan]
Yamamoto Y.,
Aiba H.,
Baba T.,
Hayashi K.,
Inada T.,
Isono K.,
Itoh T.,
Kimura S.,
Kitagawa M.,
Makino K.,
Miki T.,
Mitsuhashi N.,
Mizobuchi K.,
Mori H.,
Nakade S.,
Nakamura Y.,
Nashimoto H.,
Oshima T.,
Oyama S.,
Saito N.,
Sampei G.,
Satoh Y.,
Sivasundaram S.,
Tagami H.,
Takahashi H.,
Takeda J.,
Takemoto K.,
Uehara K.,
Wada C.,
Yamagata S.,
Horiuchi T.;
"Construction of a contiguous 874-kb sequence of the Escherichia coli-K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features.";
DNA Res. 4:91-113(1997).
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[3]
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NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
DOI=10.1126/science.277.5331.1453; PubMed=9278503 [NCBI, ExPASy, EBI, Israel, Japan]
Blattner F.R.,
Plunkett G. III,
Bloch C.A.,
Perna N.T.,
Burland V.,
Riley M.,
Collado-Vides J.,
Glasner J.D.,
Rode C.K.,
Mayhew G.F.,
Gregor J.,
Davis N.W.,
Kirkpatrick H.A.,
Goeden M.A.,
Rose D.J.,
Mau B.,
Shao Y.;
"The complete genome sequence of Escherichia coli K-12.";
Science 277:1453-1474(1997).
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[4]
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NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
DOI=10.1038/msb4100049; PubMed=16738553 [NCBI, ExPASy, EBI, Israel, Japan]
Hayashi K.,
Morooka N.,
Yamamoto Y.,
Fujita K.,
Isono K.,
Choi S.,
Ohtsubo E.,
Baba T.,
Wanner B.L.,
Mori H.,
Horiuchi T.;
"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.";
Mol. Syst. Biol. 2:E1-E5(2006).
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[5]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-10.
DOI=10.1016/0378-1119(83)90059-8; PubMed=6190704 [NCBI, ExPASy, EBI, Israel, Japan]
Plamann M.D.,
Stauffer G.V.;
"Characterization of the Escherichia coli gene for serine hydroxymethyltransferase.";
Gene 22:9-18(1983).
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[6]
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PARTIAL PROTEIN SEQUENCE, AND FUNCTION AS A FERRISIDEROPHORE REDUCTASE.
STRAIN=K12;
DOI=10.1016/0014-5793(92)80452-M; PubMed=1601132 [NCBI, ExPASy, EBI, Israel, Japan]
Andrews S.C.,
Shipley D.,
Keen J.N.,
Findlay J.B.C.,
Harrison P.M.,
Guest J.R.;
"The haemoglobin-like protein (HMP) of Escherichia coli has ferrisiderophore reductase activity and its C-terminal domain shares homology with ferredoxin NADP+ reductases.";
FEBS Lett. 302:247-252(1992).
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[7]
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PROTEIN SEQUENCE OF 1-12.
STRAIN=K12 / EMG2;
PubMed=9298646 [NCBI, ExPASy, EBI, Israel, Japan]
Link A.J.,
Robison K.,
Church G.M.;
"Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12.";
Electrophoresis 18:1259-1313(1997).
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[8]
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PROTEIN SEQUENCE OF 1-20, AND CHARACTERIZATION.
DOI=10.1073/pnas.95.18.10378; PubMed=9724711 [NCBI, ExPASy, EBI, Israel, Japan]
Gardner P.R.,
Gardner A.M.,
Martin L.A.,
Salzman A.L.;
"Nitric oxide dioxygenase: an enzymic function for flavohemoglobin.";
Proc. Natl. Acad. Sci. U.S.A. 95:10378-10383(1998).
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[9]
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RAPID-SCAN AND FLASH PHOTOLYSIS SPECTROSCOPY.
DOI=10.1016/S0006-291X(05)81463-9; PubMed=1325799 [NCBI, ExPASy, EBI, Israel, Japan]
Orii Y.,
Ioannidis N.,
Poole R.K.;
"The oxygenated flavohaemoglobin from Escherichia coli: evidence from photodissociation and rapid-scan studies for two kinetic and spectral forms.";
Biochem. Biophys. Res. Commun. 187:94-100(1992).
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[10]
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FUNCTION AS A FERRIC CITRATE REDUCTASE.
DOI=10.1006/bbrc.1994.1018; PubMed=8292013 [NCBI, ExPASy, EBI, Israel, Japan]
Eschenbrenner M.,
Coves J.,
Fontecave M.;
"Ferric reductases in Escherichia coli: the contribution of the haemoglobin-like protein.";
Biochem. Biophys. Res. Commun. 198:127-131(1994).
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[11]
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SUBCELLULAR LOCATION.
DOI=10.1016/0378-1097(94)00501-H; PubMed=7875569 [NCBI, ExPASy, EBI, Israel, Japan]
Vasudevan S.G.,
Tang P.,
Dixon N.E.,
Poole R.K.;
"Distribution of the flavohaemoglobin, HMP, between periplasm and cytoplasm in Escherichia coli.";
FEMS Microbiol. Lett. 125:219-224(1995).
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[12]
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FUNCTION AS A NADH OXIDASE, AND ROLE IN OXIDATIVE STRESS.
DOI=10.1016/0014-5793(96)00154-8; PubMed=8612736 [NCBI, ExPASy, EBI, Israel, Japan]
Membrillo-Hernandez J.,
Ioannidis N.,
Poole R.K.;
"The flavohaemoglobin (HMP) of Escherichia coli generates superoxide in vitro and causes oxidative stress in vivo.";
FEBS Lett. 382:141-144(1996).
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[13]
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TRANSCRIPTIONAL REGULATION.
STRAIN=K12;
PubMed=8808940 [NCBI, ExPASy, EBI, Israel, Japan]
Poole R.K.,
Anjum M.F.,
Membrillo-Hernandez J.,
Kim S.O.,
Hughes M.N.,
Stewart V.;
"Nitric oxide, nitrite, and Fnr regulation of hmp (flavohemoglobin) gene expression in Escherichia coli K-12.";
J. Bacteriol. 178:5487-5492(1996).
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[14]
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FUNCTION AS A AEROBIC NADH OXIDASE AND ANAEROBIC FAD REDUCTASE.
PubMed=8704956 [NCBI, ExPASy, EBI, Israel, Japan]
Poole R.K.,
Ioannidis N.,
Orii Y.;
"Reactions of the Escherichia coli flavohaemoglobin (Hmp) with NADH and near-micromolar oxygen: oxygen affinity of NADH oxidase activity.";
Microbiology 142:1141-1148(1996).
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[15]
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TRANSCRIPTIONAL REGULATION.
STRAIN=K12;
PubMed=9150210 [NCBI, ExPASy, EBI, Israel, Japan]
Membrillo-Hernandez J.,
Kim S.O.,
Cook G.M.,
Poole R.K.;
"Paraquat regulation of hmp (flavohemoglobin) gene expression in Escherichia coli K-12 is SoxRS independent but modulated by sigma S.";
J. Bacteriol. 179:3164-3170(1997).
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[16]
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FUNCTION AS A CYTOCHROME C REDUCTASE AND FERRISIDEROPHORE REDUCTASE.
PubMed=9168606 [NCBI, ExPASy, EBI, Israel, Japan]
Poole R.K.,
Rogers N.J.,
D'mello R.A.M.,
Hughes M.N.,
Orii Y.;
"Escherichia coli flavohaemoglobin (Hmp) reduces cytochrome c and Fe(III)-hydroxamate K by electron transfer from NADH via FAD: sensitivity of oxidoreductase activity to haem-bound dioxygen.";
Microbiology 143:1557-1565(1997).
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[17]
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FUNCTION AS A NADH AND NADPH OXIDASE.
DOI=10.1111/j.1574-6968.1998.tb13893.x; PubMed=9770277 [NCBI, ExPASy, EBI, Israel, Japan]
Anjum M.F.,
Ioannidis N.,
Poole R.K.;
"Response of the NAD(P)H-oxidising flavohaemoglobin (Hmp) to prolonged oxidative stress and implications for its physiological role in Escherichia coli.";
FEMS Microbiol. Lett. 166:219-223(1998).
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[18]
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ROLE IN NITRIC OXIDE DETOXIFICATION.
DOI=10.1074/jbc.273.41.26528; PubMed=9756889 [NCBI, ExPASy, EBI, Israel, Japan]
Gardner P.R.,
Costantino G.,
Salzman A.L.;
"Constitutive and adaptive detoxification of nitric oxide in Escherichia coli. Role of nitric-oxide dioxygenase in the protection of aconitase.";
J. Biol. Chem. 273:26528-26533(1998).
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[19]
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TRANSCRIPTIONAL REGULATION BY NITRIC OXIDE DONORS.
STRAIN=K12;
PubMed=9767577 [NCBI, ExPASy, EBI, Israel, Japan]
Membrillo-Hernandez J.,
Coopamah M.D.,
Channa A.,
Hughes M.N.,
Poole R.K.;
"A novel mechanism for upregulation of the Escherichia coli K-12 hmp (flavohaemoglobin) gene by the 'NO releaser', S-nitrosoglutathione: nitrosation of homocysteine and modulation of MetR binding to the glyA-hmp intergenic region.";
Mol. Microbiol. 29:1101-1112(1998).
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[20]
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FUNCTION AS A NITRIC OXIDE DIOXYGENASE.
DOI=10.1073/pnas.95.24.14100; PubMed=9826660 [NCBI, ExPASy, EBI, Israel, Japan]
Hausladen A.,
Gow A.,
Stamler J.S.;
"Nitrosative stress: metabolic pathway involving the flavohemoglobin.";
Proc. Natl. Acad. Sci. U.S.A. 95:14100-14105(1998).
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[21]
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FUNCTION AS AN ANAEROBIC NITRIC OXIDE REDUCTASE.
DOI=10.1016/S0014-5793(99)00157-X; PubMed=10094495 [NCBI, ExPASy, EBI, Israel, Japan]
Kim S.O.,
Orii Y.,
Lloyd D.,
Hughes M.N.,
Poole R.K.;
"Anoxic function for the Escherichia coli flavohaemoglobin (Hmp): reversible binding of nitric oxide and reduction to nitrous oxide.";
FEBS Lett. 445:389-394(1999).
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[22]
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ROLE IN RESISTANCE TO NITRIC OXIDE AND PARAQUAT.
DOI=10.1074/jbc.274.2.748; PubMed=9873011 [NCBI, ExPASy, EBI, Israel, Japan]
Membrillo-Hernandez J.,
Coopamah M.D.,
Anjum M.F.,
Stevanin T.M.,
Kelly A.,
Hughes M.N.,
Poole R.K.;
"The flavohemoglobin of Escherichia coli confers resistance to a nitrosating agent, a 'nitric oxide releaser', and paraquat and is essential for transcriptional responses to oxidative stress.";
J. Biol. Chem. 274:748-754(1999).
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[23]
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BIOPHYSICOCHEMICAL PROPERTIES, AND MUTAGENESIS OF TYR-29.
DOI=10.1074/jbc.275.17.12581; PubMed=10777548 [NCBI, ExPASy, EBI, Israel, Japan]
Gardner A.M.,
Martin L.A.,
Gardner P.R.,
Dou Y.,
Olson J.S.;
"Steady-state and transient kinetics of Escherichia coli nitric-oxide dioxygenase (flavohemoglobin). The B10 tyrosine hydroxyl is essential for dioxygen binding and catalysis.";
J. Biol. Chem. 275:12581-12589(2000).
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[24]
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CHARACTERIZATION.
DOI=10.1074/jbc.M004141200; PubMed=10922365 [NCBI, ExPASy, EBI, Israel, Japan]
Gardner P.R.,
Gardner A.M.,
Martin L.A.,
Dou Y.,
Li T.,
Olson J.S.,
Zhu H.,
Riggs A.F.;
"Nitric-oxide dioxygenase activity and function of flavohemoglobins. Sensitivity to nitric oxide and carbon monoxide inhibition.";
J. Biol. Chem. 275:31581-31587(2000).
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[25]
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ROLE IN NITRIC OXIDE DETOXIFICATION.
DOI=10.1074/jbc.M002471200; PubMed=10915782 [NCBI, ExPASy, EBI, Israel, Japan]
Stevanin T.M.,
Ioannidis N.,
Mills C.E.,
Kim S.O.,
Hughes M.N.,
Poole R.K.;
"Flavohemoglobin Hmp affords inducible protection for Escherichia coli respiration, catalyzed by cytochromes bo' or bd, from nitric oxide.";
J. Biol. Chem. 275:35868-35875(2000).
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[26]
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CHARACTERIZATION.
DOI=10.1042/0264-6021:3530207; PubMed=11139382 [NCBI, ExPASy, EBI, Israel, Japan]
Mills C.E.,
Sedelnikova S.,
Soeballe B.,
Hughes M.N.,
Poole R.K.;
"Escherichia coli flavohaemoglobin (Hmp) with equistoichiometric FAD and haem contents has a low affinity for dioxygen in the absence or presence of nitric oxide.";
Biochem. J. 353:207-213(2001).
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[27]
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INFRARED SPECTROSCOPY.
DOI=10.1016/S0167-4838(01)00256-4; PubMed=11690654 [NCBI, ExPASy, EBI, Israel, Japan]
Bonamore A.,
Chiancone E.,
Boffi A.;
"The distal heme pocket of Escherichia coli flavohemoglobin probed by infrared spectroscopy.";
Biochim. Biophys. Acta 1549:174-178(2001).
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[28]
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ACTIVE SITE, AND RESONANCE RAMAN SPECTROSCOPY.
DOI=10.1074/jbc.M009280200; PubMed=11092893 [NCBI, ExPASy, EBI, Israel, Japan]
Mukai M.,
Mills C.E.,
Poole R.K.,
Yeh S.-R.;
"Flavohemoglobin, a globin with a peroxidase-like catalytic site.";
J. Biol. Chem. 276:7272-7277(2001).
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[29]
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DENITROSYLASE ACTIVITY.
DOI=10.1073/pnas.181199698; PubMed=11517313 [NCBI, ExPASy, EBI, Israel, Japan]
Hausladen A.,
Gow A.,
Stamler J.S.;
"Flavohemoglobin denitrosylase catalyzes the reaction of a nitroxyl equivalent with molecular oxygen.";
Proc. Natl. Acad. Sci. U.S.A. 98:10108-10112(2001).
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[30]
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ENZYME ACTIVITY, AND ROLE IN AEROBIC NITRIC OXIDE DETOXIFICATION.
DOI=10.1074/jbc.M110470200; PubMed=11751864 [NCBI, ExPASy, EBI, Israel, Japan]
Gardner A.M.,
Gardner P.R.;
"Flavohemoglobin detoxifies nitric oxide in aerobic, but not anaerobic, Escherichia coli. Evidence for a novel inducible anaerobic nitric oxide-scavenging activity.";
J. Biol. Chem. 277:8166-8171(2002).
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[31]
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INTERACTION WITH LIPIDS.
DOI=10.1021/bi0206311; PubMed=12741837 [NCBI, ExPASy, EBI, Israel, Japan]
Bonamore A.,
Farina A.,
Gattoni M.,
Schinina M.E.,
Bellelli A.,
Boffi A.;
"Interaction with membrane lipids and heme ligand binding properties of Escherichia coli flavohemoglobin.";
Biochemistry 42:5792-5801(2003).
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[32]
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ALKYLHYDROPEROXIDE REDUCTASE ACTIVITY.
DOI=10.1074/jbc.M301285200; PubMed=12663656 [NCBI, ExPASy, EBI, Israel, Japan]
Bonamore A.,
Gentili P.,
Ilari A.,
Schinina M.E.,
Boffi A.;
"Escherichia coli flavohemoglobin is an efficient alkylhydroperoxide reductase.";
J. Biol. Chem. 278:22272-22277(2003).
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[33]
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ROLE IN NITRIC OXIDE FORMATION.
DOI=10.1074/jbc.M303282200; PubMed=12783887 [NCBI, ExPASy, EBI, Israel, Japan]
Corker H.,
Poole R.K.;
"Nitric oxide formation by Escherichia coli. Dependence on nitrite reductase, the NO-sensing regulator Fnr, and flavohemoglobin Hmp.";
J. Biol. Chem. 278:31584-31592(2003).
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[34]
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CHARACTERIZATION OF SEPARATE FUNCTIONAL DOMAINS.
DOI=10.1074/jbc.M303629200; PubMed=12826671 [NCBI, ExPASy, EBI, Israel, Japan]
Hernandez-Urzua E.,
Mills C.E.,
White G.P.,
Contreras-Zentella M.L.,
Escamilla E.,
Vasudevan S.G.,
Membrillo-Hernandez J.,
Poole R.K.;
"Flavohemoglobin Hmp, but not its individual domains, confers protection from respiratory inhibition by nitric oxide in Escherichia coli.";
J. Biol. Chem. 278:34975-34982(2003).
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[35]
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X-RAY CRYSTALLOGRAPHY (2.19 ANGSTROMS).
DOI=10.1074/jbc.M202228200; PubMed=11964402 [NCBI, ExPASy, EBI, Israel, Japan]
Ilari A.,
Bonamore A.,
Farina A.,
Johnson K.A.,
Boffi A.;
"The X-ray structure of ferric Escherichia coli flavohemoglobin reveals an unexpected geometry of the distal heme pocket.";
J. Biol. Chem. 277:23725-23732(2002).
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[36]
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REVIEW.
PubMed=10844666 [NCBI, ExPASy, EBI, Israel, Japan]
Poole R.K.,
Hughes M.N.;
"New functions for the ancient globin family: bacterial responses to nitric oxide and nitrosative stress.";
Mol. Microbiol. 36:775-783(2000).
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[37]
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REVIEW.
DOI=10.1016/S0168-6445(03)00056-1; PubMed=14550944 [NCBI, ExPASy, EBI, Israel, Japan]
Frey A.D.,
Kallio P.T.;
"Bacterial hemoglobins and flavohemoglobins: versatile proteins and their impact on microbiology and biotechnology.";
FEMS Microbiol. Rev. 27:525-545(2003).
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