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UniProtKB/Swiss-Prot entry P21816


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name CDO1_RAT
Primary accession number P21816
Secondary accession number Q6NS32
Integrated into Swiss-Prot on May 1, 1991
Sequence was last modified on May 1, 1991 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 63)
Name and origin of the protein
Protein name Cysteine dioxygenase type 1
Synonyms EC 1.13.11.20
Cysteine dioxygenase type I
CDO-I
CDO
Gene name
Name: Cdo1
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND PARTIAL PROTEIN SEQUENCE.
TISSUE=Liver;
DOI=10.1016/0006-291X(90)92345-Z; PubMed=2334417 [NCBI, ExPASy, EBI, Israel, Japan]
Hosokawa Y., Matsumoto A., Oka J., Itakura H., Yamaguchi K.;
"Isolation and characterization of a cDNA for rat liver cysteine dioxygenase.";
Biochem. Biophys. Res. Commun. 168:473-478(1990).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND TISSUE SPECIFICITY.
STRAIN=Sprague-Dawley;
TISSUE=Liver;
DOI=10.1016/S0378-1119(96)00496-9; PubMed=8973325 [NCBI, ExPASy, EBI, Israel, Japan]
Tsuboyama N., Hosokawa Y., Totani M., Oka J., Matsumoto A., Koide T., Kodama H.;
"Structural organization and tissue-specific expression of the gene encoding rat cysteine dioxygenase.";
Gene 181:161-165(1996).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Lung;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
X-RAY CRYSTALLOGRAPHY (1.5 ANGSTROMS) IN COMPLEX WITH IRON, AND CROSS-LINK.
DOI=10.1074/jbc.M601555200; PubMed=16611640 [NCBI, ExPASy, EBI, Israel, Japan]
Simmons C.R., Liu Q., Huang Q., Hao Q., Begley T.P., Karplus P.A., Stipanuk M.H.;
"Crystal structure of mammalian cysteine dioxygenase. A novel mononuclear iron center for cysteine thiol oxidation.";
J. Biol. Chem. 281:18723-18733(2006).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
M35266; AAA40904.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
D83481; BAA11925.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC070509; AAH70509.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A34632; A34632.
RefSeq NP_434696.1; -.
UniGene Rn.2589
3D structure databases
PDB
2B5H; X-ray; 1.50 A; A=1-200.[ExPASy / RCSB / EBI]
2GH2; X-ray; 1.50 A; A=1-200.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 2B5H; -.
2GH2; -.
ModBase P21816.
Enzyme and pathway databases
BioCyc MetaCyc:MON-8844; -.
Organism-specific databases
RGD 69262; Cdo1.
Gene expression databases
ArrayExpress P21816; -.
GermOnline ENSRNOG00000000158; Rattus norvegicus.
Ontologies
GO
GO:0017172; Molecular function: cysteine dioxygenase activity (inferred from direct assay from UniProtKB).
QuickGo view.
Family and domain databases
InterPro IPR010300; Cys_dOase_I.
Graphical view of domain structure.
Pfam PF05995; CDO_I; 1.
Pfam graphical view of domain structure.
BLOCKS P21816.
Genome annotation databases
Ensembl ENSRNOG00000000158; Rattus norvegicus. [Contig view]
GeneID 81718; -.
KEGG rno:81718; -.
Phylogenomic databases
HOVERGEN P21816; -.
Other
ProtoNet P21816.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Dioxygenase; Direct protein sequencing; Iron; Metal-binding; Oxidoreductase; Phosphoprotein; Thioether bond.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   200  200     Cysteine dioxygenase type 1. PRO_0000206609
METAL   86    86        Iron; catalytic. 
METAL   88    88        Iron; catalytic. 
METAL   140   140        Iron; catalytic. 
MOD_RES   59    59        Phosphothreonine (By similarity). 
CROSSLNK   93   157        3'-(S-cysteinyl)-tyrosine (Cys-Tyr). 
CONFLICT   89    89        T -> S (in Ref. 3; AAH70509). 
HELIX   12    22  11      
STRAND   24    27  4      
HELIX   30    39  10      
HELIX   44    47  4      
HELIX   48    50  3      
STRAND   55    57  3      
STRAND   59    64  6      
HELIX   66    68  3      
STRAND   71    77  7      
STRAND   92   100  9      
STRAND   102   107  6      
STRAND   121   125  5      
STRAND   130   133  4      
TURN   135   137  3      
STRAND   139   143  5      
STRAND   151   159  9      
STRAND   162   167  6      
TURN   169   171  3      
STRAND   174   178  5      
STRAND   182   184  3      
Sequence information
Length: 200 AA [This is the length of the unprocessed precursor] Molecular weight: 23026 Da [This is the MW of the unprocessed precursor] CRC64: 118F1A3326B340F9 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MERTELLKPR TLADLIRILH ELFAGDEVNV EEVQAVLEAY ESNPAEWALY AKFDQYRYTR 

        70         80         90        100        110        120 
NLVDQGNGKF NLMILCWGEG HGSSIHDHTD SHCFLKLLQG NLKETLFDWP DKKSNEMIKK 

       130        140        150        160        170        180 
SERTLRENQC AYINDSIGLH RVENVSHTEP AVSLHLYSPP FDTCHAFDQR TGHKNKVTMT 

       190        200 
FHSKFGIRTP FTTSGSLENN 

P21816 in FASTA format

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