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UniProtKB/Swiss-Prot entry P19914


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DCMM_HYDPS
Primary accession number P19914
Secondary accession number Q9ZAR7
Integrated into Swiss-Prot on February 1, 1991
Sequence was last modified on July 11, 2002 (Sequence version 2)
Annotations were last modified on    September 2, 2008 (Entry version 60)
Name and origin of the protein
Protein name Carbon monoxide dehydrogenase medium chain
Synonyms CO dehydrogenase subunit M
CO-DH M
EC 1.2.99.2
Gene name
Name: cutM
From
Hydrogenophaga pseudoflava (Pseudomonas carboxydoflava) [TaxID: 47421] 
Taxonomy Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=10482497 [NCBI, ExPASy, EBI, Israel, Japan]
Kang B.S., Kim Y.M.;
"Cloning and molecular characterization of the genes for carbon monoxide dehydrogenase and localization of molybdopterin, flavin adenine dinucleotide, and iron-sulfur centers in the enzyme of Hydrogenophaga pseudoflava.";
J. Bacteriol. 181:5581-5590(1999).
[2]
PROTEIN SEQUENCE OF 1-14.
DOI=10.1007/BF00425170; PubMed=2818128 [NCBI, ExPASy, EBI, Israel, Japan]
Kraut M., Hugendieck I., Herwig S., Meyer O.;
"Homology and distribution of CO dehydrogenase structural genes in carboxydotrophic bacteria.";
Arch. Microbiol. 152:335-341(1989).
[3]
X-RAY CRYSTALLOGRAPHY (2.25 ANGSTROMS).
DOI=10.1006/jmbi.2000.4023; PubMed=10966817 [NCBI, ExPASy, EBI, Israel, Japan]
Haenzelmann P., Dobbek H., Gremer L., Huber R., Meyer O.;
"The effect of intracellular molybdenum in Hydrogenophaga pseudoflava on the crystallographic structure of the seleno-molybdo-iron-sulfur flavoenzyme carbon monoxide dehydrogenase.";
J. Mol. Biol. 301:1221-1235(2000).
[4]
REVIEW.
DOI=10.1515/BC.2000.108; PubMed=11076018 [NCBI, ExPASy, EBI, Israel, Japan]
Meyer O., Gremer L., Ferner R., Ferner M., Dobbek H., Gnida M., Meyer-Klaucke W., Huber R.;
"The role of Se, Mo and Fe in the structure and function of carbon monoxide dehydrogenase.";
Biol. Chem. 381:865-876(2000).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U80806; AAD00361.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
PDB
1FFU; X-ray; 2.35 A; C/F=1-287.[ExPASy / RCSB / EBI]
1FFV; X-ray; 2.25 A; C/F=1-287.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1FFU; -.
1FFV; -.
ModBase P19914.
Family and domain databases
InterPro IPR005107; CO_DHase_flav_C.
IPR016169; CO_DHase_flavot_FAD-bd_sub2.
IPR016167; FAD-bd_2_sub1.
IPR002346; Mopterin_DHase_FAD-bd.
Graphical view of domain structure.
Gene3D G3DSA:3.30.390.50; CO_DH_flav_C; 1.
G3DSA:3.30.465.10; CO_DH_flavoprot_FAD-bd_sub2; 1.
G3DSA:3.30.43.10; FAD-binding_2_sub1; 1.
Pfam PF03450; CO_deh_flav_C; 1.
PF00941; FAD_binding_5; 1.
Pfam graphical view of domain structure.
PROSITE PS51387; FAD_PCMH; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS P19914.
Other
ProtoNet P19914.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Direct protein sequencing; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   287  287     Carbon monoxide dehydrogenase medium chain. PRO_0000079812
DOMAIN   1   177  177     FAD-binding PCMH-type. 
NP_BIND   32    36  5     FAD. 
NP_BIND   111   115  5     FAD. 
CONFLICT   2     3        IP -> MI (in Ref. 2; AA sequence). 
CONFLICT   13    13        S -> H (in Ref. 2; AA sequence). 
STRAND   7     9  3      
HELIX   14    24  11      
HELIX   25    27  3      
STRAND   28    33  6      
HELIX   37    42  6      
STRAND   49    53  5      
HELIX   58    60  3      
STRAND   63    66  4      
STRAND   69    73  5      
HELIX   78    83  6      
HELIX   85    90  6      
HELIX   92    97  6      
HELIX   98   100  3      
HELIX   104   107  4      
HELIX   112   118  7      
HELIX   125   131  7      
STRAND   135   139  5      
STRAND   144   149  6      
STRAND   153   155  3      
STRAND   158   160  3      
STRAND   166   173  8      
STRAND   180   186  7      
STRAND   195   205  11      
STRAND   208   222  15      
HELIX   227   231  5      
HELIX   240   252  13      
HELIX   264   285  22      
Sequence information
Length: 287 AA [This is the length of the unprocessed precursor] Molecular weight: 30722 Da [This is the MW of the unprocessed precursor] CRC64: F3E9848BDCF4138E [This is a checksum on the sequence]
        10         20         30         40         50         60 
MIPPRFEYHA PKSVGEAVAL LGQLGSDAKL LAGGHSLLPM MKLRFAQPEH LIDINRIPEL 

        70         80         90        100        110        120 
RGIREEGSTV VIGAMTVEND LISSPIVQAR LPLLAEAAKL IADPQVRNRG TIGGDIAHGH 

       130        140        150        160        170        180 
PGNDHPALSI AVEAHFVLEG PNGRRTVPAD GFFLGTYMTL LEENEVMVEI RVPAFAQGTG 

       190        200        210        220        230        240 
WAYEKLKRKT GDWATAGCAV VMRKSGNTVS HIRIALTNVA PTALRREGGR SRLLGKAFTK 

       250        260        270        280 
EAVQAAADAA IAICEPAEDL RGDADYKTAM AGQMVKRALN AAWARCA 

P19914 in FASTA format

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