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UniProtKB/Swiss-Prot entry P11966


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ODPB_BOVIN
Primary accession number P11966
Secondary accession numbers A6QQW6 Q58CN6
Integrated into Swiss-Prot on October 1, 1989
Sequence was last modified on October 17, 2006 (Sequence version 2)
Annotations were last modified on    September 2, 2008 (Entry version 54)
Name and origin of the protein
Protein name Pyruvate dehydrogenase E1 component subunit beta, mitochondrial [Precursor]
Synonyms PDHE1-B
EC 1.2.4.1
Gene name
Name: PDHB
From
Bos taurus (Bovine) [TaxID: 9913] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
DOI=10.1186/1471-2164-6-166; PubMed=16305752 [NCBI, ExPASy, EBI, Israel, Japan]
Harhay G.P., Sonstegard T.S., Keele J.W., Heaton M.P., Clawson M.L., Snelling W.M., Wiedmann R.T., Van Tassell C.P., Smith T.P.L.;
"Characterization of 954 bovine full-CDS cDNA sequences.";
BMC Genomics 6:166-166(2005).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=Hereford;
TISSUE=Heart ventricle;
NIH - Mammalian Gene Collection (MGC) project;
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
[3]
PROTEIN SEQUENCE OF 31-54.
DOI=10.1016/0006-291X(88)90714-0; PubMed=2829898 [NCBI, ExPASy, EBI, Israel, Japan]
Ho L., Javed A.A., Pepin R.A., Thekkumkara T.J., Raefsky C., Mole J.E., Caliendo A.M., Kwon M.S., Kerr D.S., Patel M.S.;
"Identification of a cDNA clone for the beta-subunit of the pyruvate dehydrogenase component of human pyruvate dehydrogenase complex.";
Biochem. Biophys. Res. Commun. 150:904-908(1988).
Comments
  • FUNCTION: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).
  • CATALYTIC ACTIVITY: Pyruvate + [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine = [dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine + CO2.
  • COFACTOR: Thiamine pyrophosphate.
  • SUBUNIT: Tetramer of 2 alpha and 2 beta subunits.
  • SUBCELLULAR LOCATION: Mitochondrion matrix.
  • SEQUENCE CAUTION:
    • Sequence=AAX46758.1; Type=Frameshift; Positions=201;
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BT021911; AAX46758.1; ALT_FRAME; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC150020; AAI50021.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR B27712; B27712.
RefSeq NP_001030512.2; -.
UniGene Bt.49794
3D structure databases
HSSP P11177; 1NI4. [HSSP ENTRY / PDB]
SMR P11966; 30-359.
ModBase P11966.
Ontologies
GO
GO:0005759; Cellular component: mitochondrial matrix (inferred from electronic annotation from UniProtKB-SubCell).
QuickGo view.
Family and domain databases
InterPro IPR005476; Transketo_C.
IPR005475; Transketo_Cen_R.
IPR015941; Transketolase_C-like.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.920; Transketo_C_like; 1.
Pfam PF02779; Transket_pyr; 1.
PF02780; Transketolase_C; 1.
Pfam graphical view of domain structure.
BLOCKS P11966.
Genome annotation databases
Ensembl ENSBTAG00000021724; Bos taurus. [Contig view]
GeneID 613610; -.
KEGG bta:613610; -.
Phylogenomic databases
HOVERGEN P11966; -.
Other
ProtoNet P11966.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Direct protein sequencing; Glycolysis; Mitochondrion; Oxidoreductase; Phosphoprotein; Pyruvate; Thiamine pyrophosphate; Transit peptide.
Features
SEVIEWER logo Feature table viewer
KeyFrom  To Length Description FTId
TRANSIT   1    30  30     Mitochondrion. 
CHAIN   31   359  329     Pyruvate dehydrogenase E1 component subunit beta, mitochondrial. PRO_0000162216
BINDING   89    89        Thiamine pyrophosphate (By similarity). 
MOD_RES   67    67        Phosphotyrosine (By similarity). 
Sequence information
Length: 359 AA [This is the length of the unprocessed precursor] Molecular weight: 39126 Da [This is the MW of the unprocessed precursor] CRC64: 584B86D36A233EFC [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAVVAVLVRK PLEQVSGLLR RRFHRTAPAA LQVTVREAIN QGMDEELERD EKVFLLGEEV 

        70         80         90        100        110        120 
AQYDGAYKVS RGLWKKYGDK RIIDTPISEM GFAGIAVGAA MAGLRPICEF MTFNFSMQAI 

       130        140        150        160        170        180 
DQVINSAAKT YYMSGGLQSV PIVFRGPNGA SAGVAAQHSQ CFAAWYGHCP GLKVVSPWSS 

       190        200        210        220        230        240 
EDAKGLIKSA IRDNNPVVVL ENELMYGVPF ELPSEAQSKD FLIPIGKAKI ERQGTHVTIV 

       250        260        270        280        290        300 
AHSRPVGHCL EAATVLSKEG IECEVINLRT IRPMDIETIE GSVMKTNHLV TVEGGWPQFG 

       310        320        330        340        350 
VGAEICARIM EGPAFNFLDA PAVRVTGADV PMPYAKILED NSVPQVKDII FAIKKTLNI 

P11966 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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