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UniProtKB/Swiss-Prot entry P11960


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ODBA_RAT
Primary accession number P11960
Secondary accession numbers None
Integrated into Swiss-Prot on October 1, 1989
Sequence was last modified on October 1, 1989 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 80)
Name and origin of the protein
Protein name 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial [Precursor] [Fragment]
Synonyms EC 1.2.4.4
Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain
BCKDH E1-alpha
Gene name
Name: Bckdha
From
Rattus norvegicus (Rat) [TaxID: 10116] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=2822716 [NCBI, ExPASy, EBI, Israel, Japan]
Zhang B., Kuntz M.J., Goodwin G.W., Harris R.A., Crabb D.W.;
"Molecular cloning of a cDNA for the E1 alpha subunit of rat liver branched chain alpha-ketoacid dehydrogenase.";
J. Biol. Chem. 262:15220-15224(1987).
[2]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-333 AND SER-343, AND MASS SPECTROMETRY.
TISSUE=Liver;
DOI=10.1021/pr0503073; PubMed=16396499 [NCBI, ExPASy, EBI, Israel, Japan]
Moser K., White F.M.;
"Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.";
J. Proteome Res. 5:98-104(2006).
Comments
  • FUNCTION: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
  • CATALYTIC ACTIVITY: 3-methyl-2-oxobutanoate + [dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] lipoyllysine = [dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] S-(2-methylpropanoyl)dihydrolipoyllysine + CO2.
  • COFACTOR: Thiamine pyrophosphate.
  • SUBUNIT: Heterotetramer of alpha and beta chains (By similarity).
  • SUBCELLULAR LOCATION: Mitochondrion matrix.
  • MISCELLANEOUS: Bound potassium ions stabilize the protein structure (By similarity).
  • SIMILARITY: Belongs to the BCKDHA family.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
J02827; AAA40811.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A29468; DERTXA.
RefSeq NP_036914.1; -.
UniGene Rn.49145
3D structure databases
HSSP P12694; 1DTW. [HSSP ENTRY / PDB]
SMR P11960; 47-441.
ModBase P11960.
Protein-protein interaction databases
IntAct P11960; -.
PTM databases
PhosphoSite P11960; -.
Organism-specific databases
RGD 2196; Bckdha.
Gene expression databases
ArrayExpress P11960; -.
GermOnline ENSRNOG00000020607; Rattus norvegicus.
Ontologies
GO
GO:0005947; Cellular component: mitochondrial alpha-ketoglutarate dehydrogenase complex (inferred from sequence or structural similarity from HGNC).
GO:0003826; Molecular function: alpha-ketoacid dehydrogenase activity (inferred from sequence or structural similarity from HGNC).
GO:0009083; Biological process: branched chain family amino acid catabolic process (inferred from sequence or structural similarity from HGNC).
QuickGo view.
Family and domain databases
InterPro IPR001017; DHase_E1.
Graphical view of domain structure.
Pfam PF00676; E1_dh; 1.
Pfam graphical view of domain structure.
BLOCKS P11960.
Genome annotation databases
Ensembl ENSRNOG00000020607; Rattus norvegicus. [Contig view]
GeneID 25244; -.
KEGG rno:25244; -.
NMPDR fig|10116.3.peg.1316; -.
Phylogenomic databases
HOVERGEN P11960; -.
Other
ProtoNet P11960.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Metal-binding; Mitochondrion; Oxidoreductase; Phosphoprotein; Potassium; Thiamine pyrophosphate; Transit peptide.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
TRANSIT   <1    41  >41     Mitochondrion (By similarity). 
CHAIN   42   441  400     2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial. PRO_0000020468
REGION   153   155  3     Thiamine pyrophosphate binding (By similarity). 
METAL   202   202        Potassium (By similarity). 
METAL   207   207        Potassium (By similarity). 
METAL   208   208        Potassium (By similarity). 
MOD_RES   333   333        Phosphoserine. 
MOD_RES   341   341        Phosphotyrosine (By similarity). 
MOD_RES   343   343        Phosphoserine. 
NON_TER   1     1         
Sequence information
Length: 441 AA [This is the length of the partial sequence of the unprocessed precursor] Molecular weight: 50164 Da [This is the MW of the partial sequence of the unprocessed precursor] CRC64: FFD7709A94094C8E [This is a checksum on the sequence]
        10         20         30         40         50         60 
SAAKIWRPSR GLRQAALLLL GRPGARGLAR FHPSRQQQQQ FPSLDDKPQF PGASAEFVDK 

        70         80         90        100        110        120 
LEFIQPNVIS GIPIYRVMDR QGQIINPSED PHLPQEEVLK LYRSMTLLNT MDRILYESQR 

       130        140        150        160        170        180 
QGRISFYMTN YGEEGTHVGS AAALERTDLV FGQYREAGVL MYRDYPLELF MAQCYGNVSD 

       190        200        210        220        230        240 
PGKGRQMPVH YGCKERHFVT ISSPLATQIP QAVGAAYAAK RANANQIVIC YFGEGAASEG 

       250        260        270        280        290        300 
DAHAGFNFAA TLECPIIFFC RNNGYAISTP TSEQYRGDGI AARGPGYGIM SIRVDGNDVF 

       310        320        330        340        350        360 
AVYNATKEAR RRAVAENQPF LIEAMTYRIG HHSTSDDSSA YRSVDEVNYW DKQDHPISRL 

       370        380        390        400        410        420 
RQYLLNQGWW DEEQEKAWRK QSRKKVMEAF EQAERKLKPN PSLLFSDVYQ EMPAQLRRQQ 

       430        440 
ESLARHLQTY GEHYPLDHFD K 

P11960 in FASTA format

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